Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Reut_B5304 |
Symbol | |
ID | 3612742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia eutropha JMP134 |
Kingdom | Bacteria |
Replicon accession | NC_007348 |
Strand | + |
Start bp | 2067043 |
End bp | 2068380 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637694730 |
Product | major facilitator transporter |
Protein accession | YP_299494 |
Protein GI | 73539127 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00630409 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTCTCG ACCCGACCAC CATGGTGGCG CCCGCGCACC CGCCGGTATC CGGCCAGCAA GCGGACCACC CGGACCAGAA GAAACCGATG TCGAAGGCGT CGGCCATCAC GGCGATCACC ATCGGCGGCG CGCTGGAACT GTATGACTCC GGCGTGTACA ACTTCTTTGC CACGCTGATC ATTCCGCTCT ACTTTCCGGT GGGCAATCCG CTGGGCCAGC TGCTGCTGTC CTTCGGCACG TTTGGCGCGG GCTACCTGAT GCGCCCGCTC GGCGGCCTCG TGATCGGCGC CTACGCCGAC CGCTATGGCC GCAAGCCGGC GGTGCTGCTG TCGATGTGGC TGATGGGGCT CAGCGCGCTG ATCCTTGTCG TGACGCCGCC CTATGCGCAG TTCGGCATCA TGGCGCCGAT CCTGATGATC GTCGCGCGCC TCGTCCAGGG CTTCGCGATC GGCGGAGAAA TGGGCTCCGC CACCGCAATG CTGATGGAGT ATGCGGACGA ACGTTCGCGC GGCTTCTACA CCAGCTGGCA GACCGCCAGC CAGGGCATTG CCGCGGTCTT CGCCGCGCTG GTTGCGCTCG CGCTCAGCCA TACGCTGAGT CCGGACGCCC TGGAACACTG GGGCTGGCGC GTGGCCTTCT TGATCGGCAT CCTCGTCATT CCTGTCGGCC AGGTCATCCG CCGCCGGCTG GAAGAAACGC TAGAGGCCCC GGCTCGCAAG AAGGCCGCGG CCGGCGGCTG GCAGCTGATG CGCGCGCACT GGCGCGAACT CGTGGCCAGC GTGCTGCTGA TGACCGGCCT GGCTGCCGCC GTGCACCTGA TTGCGTACTA CCTGCCCAAC TACGCTTCGT TCCAGCTCAA CATCCCGCGC GGCGACGCGG TGTGGGCCGG CTTTGTCGCG GCAGGCATGA TGGTGATCTT CGGGCCCATT GCAGGCTTGC TGAGCGACCG GGTCGGGCGC CGCACCATGG TGTGGTGGTC GCGCATCGCG CTGCTGGTGA TGGCCTATCC GGCCTTCGTG CTGATCAACA CCTTCCCGTC GCTGACTTGC CTGCTGGTAG TGGTCGGGTG CCTGGCCATC CCGATGGCGA TGACGTCGCC CGCCACGCTG GTGCTGGTCA GCGAGGTGCT GCCCCAGCGC CTGCGCGCGA CCGGCATGGC GGTGACCTAC TACGTGGCCA TCGCGGTGTT CGGCGGCTTT GCACAGCTGT TCTCGACCGT GCTGATCCAC GTGACGGGCA GCCCCAATGC GCCGGCGTTC TACCTGATCG GCTGCGGGCT GGTGTCGCTG ATCGGGCTGC GGATGGTGCC GGAGACGCTG GGCCGGCGGC TCTCGTAG
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Protein sequence | MPLDPTTMVA PAHPPVSGQQ ADHPDQKKPM SKASAITAIT IGGALELYDS GVYNFFATLI IPLYFPVGNP LGQLLLSFGT FGAGYLMRPL GGLVIGAYAD RYGRKPAVLL SMWLMGLSAL ILVVTPPYAQ FGIMAPILMI VARLVQGFAI GGEMGSATAM LMEYADERSR GFYTSWQTAS QGIAAVFAAL VALALSHTLS PDALEHWGWR VAFLIGILVI PVGQVIRRRL EETLEAPARK KAAAGGWQLM RAHWRELVAS VLLMTGLAAA VHLIAYYLPN YASFQLNIPR GDAVWAGFVA AGMMVIFGPI AGLLSDRVGR RTMVWWSRIA LLVMAYPAFV LINTFPSLTC LLVVVGCLAI PMAMTSPATL VLVSEVLPQR LRATGMAVTY YVAIAVFGGF AQLFSTVLIH VTGSPNAPAF YLIGCGLVSL IGLRMVPETL GRRLS
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