| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_B5289 |
|---|
| Symbol | |
|---|
| ID | 3612901 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007348 |
|---|
| Strand | - |
|---|
| Start bp | 2051230 |
|---|
| End bp | 2052021 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637694715 |
|---|
| Product | Short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_299479 |
|---|
| Protein GI | 73539112 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0559291 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCATG AGGACGGACG CAGCCTGAAC CCGTTCGCTG ATCTGGAGGG CAAGGTGGCG
CTGGTCACCG GCGCCTTCGG TGGACTGGGT CTGCATTTCG CGAAGACCCT GTCGCGCGCC
GGCTGCAAGG TGGCATTGGC CGGACGGCGT GTGGGCGAAG GCGAGGCGCT GCTGGCCGAA
CTGCGCAAGC AGGGTGGACA GGGTTGCGTG GTCGCGCTCG ACGTCAGGGA CCCCACCTGG
GTCGATTCGG CATTCGAGCG AGCGCAGCAA GAGCTGGGTC CGGTGCAGAT CGTCGTCAAC
AGCGCCGGCA TTGCAACCAC CGGCGCGGCC ATGGACGTGG ACGAGGCGCA GTGGCAAAGC
GTGATCGACA CCAACCTGAA CGGCGCCTGG CGCGTGGCGC AGCGTGCCGC GCGCATGATG
CGCGACACCG ACACGCACGG CAGCATCATC AACATCGCGT CGATCCTCGG GCTACGCGTG
GCCCAGCAGG TGCCGGCATA CACCGCAGCC AAAGCGGGCC TGATCCACCT GACGCGCTCG
CTCGCGCTGG AGTGGGCGCG CCATGGCATC CGCGTCAATG CGTTGGCGCC GGGTTACTTC
GAGACCGAGA TCAACCGCAG CTTTTTCGAG ACCGAGAGCG GGCAGGCGCT GATCCGGCGC
ATCCCGCAGC GCAGGCTCGG TCAGCCGCGG CAGCTCGACG GCGCGCTGCT GTTACTGGCG
TCTGACGCAT CCGATTTCAT GACCGGCACG GTGCTGCCTG TCGACGGTGG CCATTCCATC
AATTCGCTTT AA
|
|---|
| Protein sequence | MNHEDGRSLN PFADLEGKVA LVTGAFGGLG LHFAKTLSRA GCKVALAGRR VGEGEALLAE
LRKQGGQGCV VALDVRDPTW VDSAFERAQQ ELGPVQIVVN SAGIATTGAA MDVDEAQWQS
VIDTNLNGAW RVAQRAARMM RDTDTHGSII NIASILGLRV AQQVPAYTAA KAGLIHLTRS
LALEWARHGI RVNALAPGYF ETEINRSFFE TESGQALIRR IPQRRLGQPR QLDGALLLLA
SDASDFMTGT VLPVDGGHSI NSL
|
|---|
| |