| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_B5261 |
|---|
| Symbol | |
|---|
| ID | 3612912 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007348 |
|---|
| Strand | - |
|---|
| Start bp | 2011957 |
|---|
| End bp | 2012442 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637694687 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_299451 |
|---|
| Protein GI | 73539084 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
|---|
| TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATTC CCGCATACAT GTGGATCAAG GACGACGGCG GAGCCGATAT CAAGGGCTCG
GTCACCGTGT CCGGCCGCGA GGGCAGCGTC GAAGTCGTCG CCTTCGACCA CGCCGTCAAC
ATCCCGACCG ACTCGAACAC CGGCAAGCTG ACCGGCACCC GCGTGCACAA GCCGATCGTG
TTCACCAAGG AAACGGATGC CTCGACCCCC TACCTGTACA AGGCGGTCAC CAGCGGACAG
ACGCTGAAGT CGATTGAGAT CAAGTGGTAC AAGATCGATG ACGCCGGCAA GGAGAAGGAG
TACTTCAACA CCAAGCTGGA AAACGTCAAG GTGGTCGGCG TCACGCCGAA GATGCTGGAC
ATCAAGAACC CGGCCTACGA AAAACATAAC CATCTCGAGG ACATCGAGCT GCGCTACGAG
AAGATCATCT GGTCGTATAA GGACGGCAAC ATCATTCACG CCGACAGCTG GAACGAGCGC
TCATAA
|
|---|
| Protein sequence | MAIPAYMWIK DDGGADIKGS VTVSGREGSV EVVAFDHAVN IPTDSNTGKL TGTRVHKPIV
FTKETDASTP YLYKAVTSGQ TLKSIEIKWY KIDDAGKEKE YFNTKLENVK VVGVTPKMLD
IKNPAYEKHN HLEDIELRYE KIIWSYKDGN IIHADSWNER S
|
|---|
| |