Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Reut_B4871 |
Symbol | |
ID | 3614421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia eutropha JMP134 |
Kingdom | Bacteria |
Replicon accession | NC_007348 |
Strand | - |
Start bp | 1586804 |
End bp | 1587919 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637694298 |
Product | porin |
Protein accession | YP_299063 |
Protein GI | 73538696 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000247804 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGCA AGAGCATTCA CCGTGCCGGC CAGGGGTTCC TGGCGCTGGC GGCGCTGGCG GCGTTGCCTG CGGTCGCCAC CGCGCAATCC GTGACGCTTT ATGGCGTCGT GGACACCGGC GTCGAGTACG TGGGTTCGAT CGGCGCCAAG AAGGACAGCG TGGTACGCAT ACCGAACGTC ACGGGTACCG TGCCGTCGCG CTGGGGCCTG CGTGGCACGG AGGACCTCGG TGGCGGCCTG AAGAGCGTGT TCGTGCTGGA ATCGGGGTTT GCTGCGGACT CCGGCACGTC GGGCCAGGGT GGCCGGCTGT TCGGCCGCCA GGCACTCGTT GGCTTGTCCG GCAACTGGGG ACAGGTCGCG CTGGGACGCC AGTACACGAT GCTGTTCTGG GCGATGCTGG ACGCGGATAT CCTCGGGCCG CAGGTCTACG GCACCGGTTC GCTGGACAGC TACATTCCCA ACGCGCGGGC CGACAACGCA GTTTCGTACA AGGGCACCTT CGGCGGCCTG ACTCTGGGCG CGACCTACAG CTTCGGACGC GACACCGTCA ACGCGGGCCC CAGCCCGGTC GGTACGAACT GCGCGGGCGA GAATCCGGCT GACAAGTCCG CTTGCCGCGA ATGGTCCGCG CTGATCCAGT ATGCGACCGC AAACTGGGGC GTGTCGGCGG CATACGACTC GTTGCGCGGC GGGCCGGGCG CGTTTGCCGG CCTGACCAGC AGCGGACTGA AGGATGACCG GCTCTCCGTC AGCGGCTACG CCTTGTTTGA TCGCACGAAG ATCGGTGTCG GGGTGCTCAG TCGCAACAAT GAAGGAAGTC CGACCGCGCG CAGCGAACTG TATTACGCCG GCGCAGCGTA TGACGTGACG CCTGCCTTCA CGATCGCGGG CCAGGTCAAC TACCTGAGGT ATCGCCACAG CGACAACAAG GCGCTGCTCT ACGCGCTGCG CGGGACGTAC GCGCTGTCGA AACGGACGTC GGTCTACGGC ACGGCCGGCT ACATCAACAA CGACGGTCAG CTCGCGCTGT CCGTGAGCAG CGGTGCCGCG GGCGGCAATC CCACGCCGGG CGGCTCCCAA TTCGGCTTCA TGGCGGGTGT GAAGCACGTC TTCTAG
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Protein sequence | MKRKSIHRAG QGFLALAALA ALPAVATAQS VTLYGVVDTG VEYVGSIGAK KDSVVRIPNV TGTVPSRWGL RGTEDLGGGL KSVFVLESGF AADSGTSGQG GRLFGRQALV GLSGNWGQVA LGRQYTMLFW AMLDADILGP QVYGTGSLDS YIPNARADNA VSYKGTFGGL TLGATYSFGR DTVNAGPSPV GTNCAGENPA DKSACREWSA LIQYATANWG VSAAYDSLRG GPGAFAGLTS SGLKDDRLSV SGYALFDRTK IGVGVLSRNN EGSPTARSEL YYAGAAYDVT PAFTIAGQVN YLRYRHSDNK ALLYALRGTY ALSKRTSVYG TAGYINNDGQ LALSVSSGAA GGNPTPGGSQ FGFMAGVKHV F
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