| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_B4234 |
|---|
| Symbol | |
|---|
| ID | 3612664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007348 |
|---|
| Strand | + |
|---|
| Start bp | 883354 |
|---|
| End bp | 886008 |
|---|
| Gene Length | 2655 bp |
|---|
| Protein Length | 884 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637693666 |
|---|
| Product | alpha amylase domain-containing protein |
|---|
| Protein accession | YP_298431 |
|---|
| Protein GI | 73538064 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3280] Maltooligosyl trehalose synthase |
|---|
| TIGRFAM ID | [TIGR02401] malto-oligosyltrehalose synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.116364 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCCGG CGGCGCCCGC TGACGCGCCG GTGCAACCGG CTGCGCGTGA CGCACACCTG
CCGCCGCGCG CCACGGCGCG GCTGCAGCTG CACCCCGGCT TCACGCTGGC GGACGCGGCC
GGGGTCGTGG GCTACTACGC CGCGCTCGGC GTGAGCCACC TTTACCTGTC TCCGGTGACC
GACGCACGCC CAGGTTCCAC GCACGGGTAC GACGTGACCG ATTTCACGCG CGTGCGCGAG
GCCCTTGGCG GCGAGGCCGC ACTGCGCGCG CTGGCACAGC GGGCTCACCA GTCGGGACTT
GGTCTGATCC TCGATATCGT GCCCAACCAC ATGGCTGCCG ATGCCACGCA CAACGCGTGG
TGGCGCGACG TCCTGGCGCA CGGGCAGGAC AGCCAGCACA GGGCGTGCTT TGATATCGAC
TGGCAGCCCC CCGATGCGAC GCTGCACGGC AAGGTGCTGG TTCCCATACT CGGCCATCCG
TACTGGGAAA CGCTCGCGCG CGGCGATTTG CGCGTGGTGT GGACCTCGGC AAGCGGCGCG
GCATCGCTGC GCTATTTCGA ACACGACTTC CCGCTTGCGC CGGAGAGCCT GCCCCGGCAC
GCCATGATGG ACACCGCGTG GTTCGATGCC ACGCACGAGG CCGGCCGCGA ACACCTGCAT
GCCTTGCTGG AACGCCAGCA CTATCGGTTG GCGTGGTGGC GCACCGCTGC AGCCGCGCTC
AACCGGCGGC GCTTCTTCGA GATCAGCGAC CTGGTTGGCA TCAGGCAGGA AGAGCCCACT
GTATTTGCCG CCACGCATGC GCTGGTGTTC CGGCTGCTGC GCGAAGGGGT TATTGACGGC
GTACGTGTCG ATCACGTGGA CGGGCTTGCC GATCCGGCGG CCTATTGTCG ACAGCTGCGT
GATTGCCTGG ACCAGCATGC CGGCCATCGT CCCTGGCTGG TGATAGAGAA AATCCTGGCG
CCGGGAGAGA TACTGCCTGC GGACTGGCAC GTGGACGGGA CCACCGGCTA CGACTTCATG
GACGAGGTTG CCGCCGTACT GCACAGCGAG GCGGGCCCCG CTGCGCTCAA TGCCTTGTGG
CGCCAGGCCG GCGGACGCCC CGACAGCTAC CCCGTCGCCG TGGCGGATGC GCGCCGTCAG
ATCCTGCGGC ACCATCTTGT CACCGAGTTT GACACCGCGT GCGCGCGGCT GCACGCGTAC
GCATCTGCCG ATCCCACCAC GCGGGACCTG ACGCGTGCGG CGCTGGCGCG GGCGCTAACG
GGCTGGCTCG AAGCCATCCC GGTCTATCGC AGCTACATGA GCGGCGAGCC GGCCCGGCGC
GACGCGGCTG CGCTGCGTGC CGAGCAGGCC ATGCTAGACG AAGCGGCCAG CACCGCTCGC
GAAACCCTGG CGCCCGAACA GGCTGCCGCG CTCGATTTCA TCCTGGCCTG CCTGCGGACG
CGCGAGCCAG ATGCCAGCGC GCCGGCGCAG GTCCGGCGGC GCTTGCAGCA ACTGATGCCA
GCGCTGGCCG CCAAGGCCGG CGAAGACACT GCGTTCTACC GCTATGGCCC GCTGCTGTCG
CGCAACGAGG TAGGCAGCCA TCCGGCGACC ATGGCACTGT CCGTGACGGA CTTCCATGTA
GCCATGGGTC GGCGGCAGCA ATCCTTTCCC CATGCCATGC TCGCCACCGC CACGCACGAC
CACAAGCGTG GCGAAGATGC GCGCATGCGC CTCGCGGTAC TGAGCGAGGT GCCGCAGGAA
TGGGCGGCGG CCGTGCGGGC ATGGGAAGTC GAAGCTGCCG CGCTGCTGGC ATCGCTGCCG
CAGGTGCCGG ATCCGGCAGA CCGCCTGATG CTGTATCAGT CCATGCTTGG CGCCTGGCCC
ATGCCGCGCG ACGCGCTCGG GCGCGATGGC GCGCTGGAGG CGTTTCTCGA TCGCATCGCC
CAATGGCAGC AAAAGGCCAT TCGCGAGGCC AAGCTGCATG GCAACTGGAC TATGCCGGAC
ACCGCCTACG AAGCCGCCTG CGACGCCTTC CTGCGCGGGC TGGCGGTCGG GTGGCCGCAT
GGCGGCCTGC TCGCGCGGAT CGGGCAGTTC GTCCAGCGCG TGGCCCCGGC CGGTGCCATG
AACGGATTGG CCCAGGTCAT GATCCAGCTG ACGGCGCCGG GTGTGCCGGA CCGCTACCAG
GGGCGCGAAG ACTGGGACTT GAGCCTCGTC GATCCGGATA ACCGGCGCCC GGTCGACTAC
GCACGGCTGC AGGTGCAACT GGAAAGCCCG GCGGGCTGGG CTGAATGGCT GGCGGACTGG
CGTGACGGGC GCATCAAGCA GCAGATCGTG CGCCATGTAC TGGCGGCACG CCGTGCGCAC
GAAGCGCTGT TTCGGGACGG GGACTACCAG CCGCTCGCGG CGAAAGGACC GCTGGCCGAC
CATGTGCTGG CGTTCGCGCG CACGCTGGGC GAACAGCAAG CGTTGACGGT CGTTTCCCGC
CTGGGGGCTA CGCTGGTGGC GGACATTCCC CTTGTGCCAC CGGCGCGCTG GGGCAGAACC
AGGATTGACA CGGGCACGGG CGAGGCGCGC TGCTGGGTCG ACGCCCTCAC CGGGCAAGCG
TTCGCCGCGG ACGGCCTGCG GATCCAGCAC GTGCTCGGCG CGCTTCCTGT CGCGCTACTG
TTACGGCAGG GCTGA
|
|---|
| Protein sequence | MAPAAPADAP VQPAARDAHL PPRATARLQL HPGFTLADAA GVVGYYAALG VSHLYLSPVT
DARPGSTHGY DVTDFTRVRE ALGGEAALRA LAQRAHQSGL GLILDIVPNH MAADATHNAW
WRDVLAHGQD SQHRACFDID WQPPDATLHG KVLVPILGHP YWETLARGDL RVVWTSASGA
ASLRYFEHDF PLAPESLPRH AMMDTAWFDA THEAGREHLH ALLERQHYRL AWWRTAAAAL
NRRRFFEISD LVGIRQEEPT VFAATHALVF RLLREGVIDG VRVDHVDGLA DPAAYCRQLR
DCLDQHAGHR PWLVIEKILA PGEILPADWH VDGTTGYDFM DEVAAVLHSE AGPAALNALW
RQAGGRPDSY PVAVADARRQ ILRHHLVTEF DTACARLHAY ASADPTTRDL TRAALARALT
GWLEAIPVYR SYMSGEPARR DAAALRAEQA MLDEAASTAR ETLAPEQAAA LDFILACLRT
REPDASAPAQ VRRRLQQLMP ALAAKAGEDT AFYRYGPLLS RNEVGSHPAT MALSVTDFHV
AMGRRQQSFP HAMLATATHD HKRGEDARMR LAVLSEVPQE WAAAVRAWEV EAAALLASLP
QVPDPADRLM LYQSMLGAWP MPRDALGRDG ALEAFLDRIA QWQQKAIREA KLHGNWTMPD
TAYEAACDAF LRGLAVGWPH GGLLARIGQF VQRVAPAGAM NGLAQVMIQL TAPGVPDRYQ
GREDWDLSLV DPDNRRPVDY ARLQVQLESP AGWAEWLADW RDGRIKQQIV RHVLAARRAH
EALFRDGDYQ PLAAKGPLAD HVLAFARTLG EQQALTVVSR LGATLVADIP LVPPARWGRT
RIDTGTGEAR CWVDALTGQA FAADGLRIQH VLGALPVALL LRQG
|
|---|
| |