Gene Reut_B3970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_B3970 
Symbol 
ID3614237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007348 
Strand
Start bp606374 
End bp607654 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content69% 
IMG OID637693403 
ProductOuter membrane efflux protein 
Protein accessionYP_298170 
Protein GI73537803 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.214282 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACATG TAGTGATACC GCTGGGGCTG GCTTTCGTCT TGCTCGGCCC CGTTGCGCAT 
GCCGCCACCG ATGCGGCCAT GCCGCCCGCC TTGCAGGACC AGCGCCCTGC ACAACCACAC
GACGCCGCGG AGACGCGGGC CGTGCTGACT CTCGATACCG CGCTGGCGCT TGCCATCGCC
CGCAGCCCCA CCCTTTCGGC TGCCCGACGG GAGCTCGATG CCACCGAAGG CGGCATCACG
CAAGCGCGCA CGATCCCCAA TCCGTCCGTC GGCTATGAGA TGGAAGACAC GCGGCGCGCA
TCGCGTACGA CCACCGCGCA AGTGAGCGTG CCGATCGAAC TCGGCGGCAA ACGCTCCGCT
CGCATCGGCG CCGCACAGAA GGCGCGCGAG CTCGCCAGTG CACAGTTCAG CAATGCCGAG
TCGGACCTGC GCGCCACCGT GATTGGCGCG TTTTTCCAGG TGCTGGTGGC GCAAGAACGT
GTCAGCCTGG CGGAGAGTTC GGTCGGCATC GCCACGCGCG GCACGCAGGC CGCGGCAAGG
CGCGTGGCGG CCGGCAAGGT CTCGCCCGTG GAGCAGACCC GCGCCGAGGT CGAACAGGCC
AATGCCGAAC TCGAACTGGC CGAGGCGCGC GCCACGCTCG ACGCGGCCCG CCAGCAGCTG
GCCGCCCAAT GGGGCAGCCA GCTGCCGGTG TTCGCGTCGG CAAGCGGCGA CCTGGAGGCA
CTGCCGTCGC GGCCCCTGCC CAATGTCCTC GATGAAGCGC TCGATACCGC CCCGGAGATG
CGCGCGAGCC AGAGCGAAAT GGCACGGCGC CAGGCGATAG TCAACGTAGA ACGCAGCCGC
CAGTACCCCG ACGTGACCGT GAGTGTCGGC GCCAAGCGCG AATATTCGTC GGACCGCGGG
TACTACCCGG TGCTCGGCAT CTCGCTTCCC TTGCCGCTGT TCGACCGCAA CCAGGGCAAC
CTGTACACGG CGATCCGGCA GGCCGACAAG GCCGCCGACG AATCGCGCGC CACGCGCGTA
CGGCTGGCCA GTGACCTGCG CCAGGCCTCG AACCAGCTCG CGCTGTCTCG CAATAGCGCG
CTGACGTTAC GTCAGACCGT GCTGCCTGCC GCGCAGCGTG CGTACCAGGC CGCGTCGCAA
GGATTCGAAG CTGGCAAGTT CGCCTATCTC GAAGTGCTGG ACGCCCAGCG CACGCTGCTG
CAGGCACGGG TGCGCTATCT CGGGGCCGTG GCCGCGACCT ACCAGGCCGC CACGGCCATC
GACCGCATGC TCGGCCGCTG A
 
Protein sequence
MKHVVIPLGL AFVLLGPVAH AATDAAMPPA LQDQRPAQPH DAAETRAVLT LDTALALAIA 
RSPTLSAARR ELDATEGGIT QARTIPNPSV GYEMEDTRRA SRTTTAQVSV PIELGGKRSA
RIGAAQKARE LASAQFSNAE SDLRATVIGA FFQVLVAQER VSLAESSVGI ATRGTQAAAR
RVAAGKVSPV EQTRAEVEQA NAELELAEAR ATLDAARQQL AAQWGSQLPV FASASGDLEA
LPSRPLPNVL DEALDTAPEM RASQSEMARR QAIVNVERSR QYPDVTVSVG AKREYSSDRG
YYPVLGISLP LPLFDRNQGN LYTAIRQADK AADESRATRV RLASDLRQAS NQLALSRNSA
LTLRQTVLPA AQRAYQAASQ GFEAGKFAYL EVLDAQRTLL QARVRYLGAV AATYQAATAI
DRMLGR