| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_B3616 |
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| Symbol | |
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| ID | 3613217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia eutropha JMP134 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007348 |
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| Strand | - |
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| Start bp | 178243 |
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| End bp | 179835 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637693046 |
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| Product | DNA polymerase III, epsilon subunit |
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| Protein accession | YP_297818 |
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| Protein GI | 73537451 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0322] Nuclease subunit of the excinuclease complex
[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00210343 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGACA TTTTCCCTCC CCCCTCTGAT CGCCTCTCAG GAAAGGCCCG CTTCGCCGAC
GCCCATGCAC TGGCGGCTGC GCTGTCGCGC CCCATAGTGT TCGTGGATCT GGAAACCACC
GGCGCCGATG CCCAGCACGA CCGGATCACC GAGATCGGCG TTGTCGAAGT CGGCCCCGAA
GGCATCCAGG AATGGGATAC GTTGCTTGAT CCCGGCGTAA GCATCCCACC ATTCATCCAG
CGGCTGACGG GCATCACCGA CGAGACCGTA CAAGGCCAGC CCACTTTTGC CTCGATCGCT
GAAGCCCTTG CCGAGCGCCT GCAGGGACGC CTTTTCGTCG CCCACAACGC GCGCTTTGAC
TATGGATTCC TGAAGAACGA GTTCCGCCGC GCCGGATTGA CTTTCCGCGC CGACGTACTG
TGCACGGTCA GGCTGTCACG CTCGCTGTTC CCTTCAGCGG CACGGCATGG CCTTGATGCG
ATCATCGCGC GGTTCGACTT GCAACCCCGG GCGCGCCATC GGGCACTGGC CGATGCCGAG
TTGCTGTGGC AGTTCTGGCA GAAGATCCAT GCGCTCTATT CCGTGGAACT GATCGATGCG
GCAACGGGAG CCCTGGTCAA GCGTGCCAGC CTGCCTGCAG GCCTCGAAGA AACCGCGCTC
GACGATGTGC CCGATACCGC CGGTGTCTAT CTGTTCTACG GCGATAACGA CGCCCCGCTC
TATATAGGTA AGAGCGTGCA TCTGCGGCAA CGGATCGGCG CACATTTCTC GGGTGACTAC
CGGCTAGGCA AGGACATGCG CCTCGCCCGC CTGGTGCGAC GCGTGGAATG GCGTGAGACC
GGAGGAGAAA TCGGTGCCCT GTTGCTCGAG GCAAGTCTGG TAAAAACCAT GCAGCCGCTC
CACAACCAGA TGCTGCGCGG AAGCGCTCGG CTGTACACCT GGGAACTGCC GCCCGAATTG
CCTGTGCCGC GCCTGCGCTC GGACGCCGAT ACCGATTTCA GCCGACGGGG CAATCTGTAT
GGCGCGTTCG CGAGCCGTGG CGCAGCGCAA GCCTGGCTGC GCCGGCTGGC CGATGAGCAT
CGGCTTTGCC AGGCGACCCT AACCCTGGAG AAGACCGCGC GCGCGGGCAA TCCCTGCTTC
GCGCGGCAGC TCCACCGCTG CGAGGGCGCC TGTGTGGGCG AAGAGGCGTC GCCAAGCCAC
CGGGCGAGAA TCGCGACAGC CATGGCTGAG GCGCGGCTCA AACGCTGGCC ATTTGACGGT
CCGGCCGCCT GGCCGGAAGT CTCGGGCACG CAAACCTGGT GGCACGTTGC AGAGGACTGG
TGCTATCTGG GGTCGGTGCA AACACTTGAA GACGTCACCA CCCTGCTTGC CGCGCCGGCA
CGCTTCGATC TGGATACTTA CCAGATCCTT GCTTCGCGGC TGCAGCAGTG GATGCCCAAT
GCGGTGCCGC TGACATCCAC ACGCAGCTTC GAGCTTGCCT TGTGCGAAGC GCCTGCGCCT
GATGACCGAA GCCCGCCGAA CCTGCCACAG GGGCCCGGAC GAAGCAAGGC GCCGGTGCGG
CGCCAGCCGT CGCCTGGCTT GTTTGATGAC TGA
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| Protein sequence | MQDIFPPPSD RLSGKARFAD AHALAAALSR PIVFVDLETT GADAQHDRIT EIGVVEVGPE
GIQEWDTLLD PGVSIPPFIQ RLTGITDETV QGQPTFASIA EALAERLQGR LFVAHNARFD
YGFLKNEFRR AGLTFRADVL CTVRLSRSLF PSAARHGLDA IIARFDLQPR ARHRALADAE
LLWQFWQKIH ALYSVELIDA ATGALVKRAS LPAGLEETAL DDVPDTAGVY LFYGDNDAPL
YIGKSVHLRQ RIGAHFSGDY RLGKDMRLAR LVRRVEWRET GGEIGALLLE ASLVKTMQPL
HNQMLRGSAR LYTWELPPEL PVPRLRSDAD TDFSRRGNLY GAFASRGAAQ AWLRRLADEH
RLCQATLTLE KTARAGNPCF ARQLHRCEGA CVGEEASPSH RARIATAMAE ARLKRWPFDG
PAAWPEVSGT QTWWHVAEDW CYLGSVQTLE DVTTLLAAPA RFDLDTYQIL ASRLQQWMPN
AVPLTSTRSF ELALCEAPAP DDRSPPNLPQ GPGRSKAPVR RQPSPGLFDD
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