Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Reut_B3546 |
Symbol | |
ID | 3614851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia eutropha JMP134 |
Kingdom | Bacteria |
Replicon accession | NC_007348 |
Strand | + |
Start bp | 95111 |
End bp | 96346 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637692976 |
Product | L-carnitine dehydratase/bile acid-inducible protein F |
Protein accession | YP_297748 |
Protein GI | 73537381 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.906288 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGCCCG CCATGCAGGG CGCACTGGCC GGTGTCCGGG TGCTCGACCT GTCGCGCATC CTGGCCGGGC CGTGGTGCGC GCAGAACCTG GCGGATCTCG GCGCGGAAGT CATCAAGGTG GAACGCCCCC GGGTCGGCGA CGACACGCGC TCCTGGGGCC CGCCATGGTT GCCGGATCCT GAAGGCCAGC CTTCGCGCGA TGCCACCTAC TTCGCCGGCG CCAATCGCGG CAAGCAGTCG CTGACGCTTG ACATCGCGAG CCCGGAAGGG CAGGCGATCG TGCGCGAACT CGCGGCCAAG TCGCACATCG TCCTCGAGAA CTACAAGGTC GGCGACCTGA AGCGCTACGG GCTCGACTAT GAAAGCCTCA AGGCGATCAA TCCGGCGCTG GTCTATTGCT CGATTACCGG CTATGGCCAG ACCGGGCCCA GCGCGCACAA GCCGGGCTAC GACTTCATCT TCCAGGGCAT CGGCGGACTG ATGAGCGTGA CCGGCGAGCG CGACGACCTG CCCGGTGGCG GTCCGCAGAA GGTCGGCGTG GCGGTGGTAG ACGTGCTGAC CGGCATGTAC GCGACCGTGG CTGTGCTTGC CGCACTGCGG CATGCCGAGC GCACGGGCGA AGGCCAGCAT ATCGACATGG CCCTGCTCGA CGCCGTGGTG GCCGTGGGCG CGACGCCGAT CATCGCCCAG CGCATTACCG GCCAGGCCAT GCCGCGCTAT GGCAATGCGC ACGCGAACAT GGTGCCGTAC CACGTCTTTG CGACGTCGGA TGGCTACATG ATTGTCGCGG CCGGCAACGA CGGCCAGTGG CAGGCGTATT GCCGGGGTAT CGAGCGTCCG GATCTGGCCG TCGACGAGCG CTTTGCCACG GGCTCGGGTC GTATCATCCA CCGCGAATTG CTGGTGCCGA TGCTCGAGGC CCATATGCGC ACACGTCCGA CCGCACTCTG GGTCGAGGCG CTGGAGGCGC AGGGCATTCC GTGCGGGCCG ATCAACGACT ACGCGCAGGT GCTCGACGAC CCGCAGGTCC GTCATCGCGA ACTGCAGGTC GACCTGGTCC GCAAGGACGG TGCGATCTGC CCGACGGTCA AGAGCCCGCT GCGGCTGTCA ACCACGCCGG TGCAATATGA CGCGCCGCCG CCGCGCCTTG GCGAACACAC GGAACGTGTG CTCGCCGAAG TGCTCGGTTT GTCCGCGGAG CGGATCGCTG CACTGCGGGA GCAGGGCGTG GTCTGA
|
Protein sequence | MAPAMQGALA GVRVLDLSRI LAGPWCAQNL ADLGAEVIKV ERPRVGDDTR SWGPPWLPDP EGQPSRDATY FAGANRGKQS LTLDIASPEG QAIVRELAAK SHIVLENYKV GDLKRYGLDY ESLKAINPAL VYCSITGYGQ TGPSAHKPGY DFIFQGIGGL MSVTGERDDL PGGGPQKVGV AVVDVLTGMY ATVAVLAALR HAERTGEGQH IDMALLDAVV AVGATPIIAQ RITGQAMPRY GNAHANMVPY HVFATSDGYM IVAAGNDGQW QAYCRGIERP DLAVDERFAT GSGRIIHREL LVPMLEAHMR TRPTALWVEA LEAQGIPCGP INDYAQVLDD PQVRHRELQV DLVRKDGAIC PTVKSPLRLS TTPVQYDAPP PRLGEHTERV LAEVLGLSAE RIAALREQGV V
|
| |