| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A3405 |
|---|
| Symbol | |
|---|
| ID | 3610860 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | - |
|---|
| Start bp | 3735682 |
|---|
| End bp | 3737055 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637692832 |
|---|
| Product | Fmu, rRNA SAM-dependent methyltransferase |
|---|
| Protein accession | YP_297607 |
|---|
| Protein GI | 73543087 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
|---|
| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCTGC CCCACGAATC GCTTGCCTTC CAGATGCTCG GTGCCGCCAT GGCCGTGCGT
GCCGTCAATG AAGGCACGGC CCTGCCGCAG GCCATTGAAG ATACCGCCGC GCACCTGCGC
CTGGACCGCG TGCGCGATGC CGCCACGCGC GGCGCCGTGC AGGACCTGGC CTACCGCACC
ATGCGCCAGT TCGGCACGGC GCGAGCGCTG GTCACGGAAC TGGTCACGCG CCCGCCCGGC
GCCCAGGTCG ATTCGCTGCT CGCCGTGGCG TTGTCGCTGC TGCTCGAAGG CGAGGAGGGC
GATGCGGCCA AGGCCGGCCG CGGCGGTTAT AACGCATTCA CGGTGGTGGA CCAGGCCGTC
AGCGCCGCGG CATCCGAACC CAAGACTGCG CATGCGCGCG GCCTCGTGAA CGCCGTGCTG
CGGCGTTTCC TGCGTGAACG CAAGGCGCTG CTCGCCGAAG TCAGCCGCGA CGACCAGGCG
CGCTGGAACC TGCCCGAATG GTGGCTGCGC ATGCTGCGCG AAGCCTATCC CGACCAGTGG
ACAGCGCTCG CCGAAAGCGC GAACGTGCGT CCGCCTATGA CACTGCGCGT CAATACGGCA
CGCATCCCGT TGCAGCAATA CCTGACGGAT CTTGCCAATG CCGGACTGGC CGGCCAGGCC
ATCGGCACGC AGGCCGTGCG ACTGGTTCGC GCAGTGCCGG TCTCCCAAGT CCCGGGATTT
GATCGCGGCG ATGTCTCGGT ACAGGACGCC GGCGCGCAGC TCGCGGCGCC GCTGCTCGAG
GTAGCCGACG GCATGCGCGT GCTCGACGCG TGCGCCGCGC CCGGCGGCAA GACGGGGCAT
CTGCTGGAGT TGGCCGATAT CGACGTGACT GCCGTGGAGA GCGACGCGCA ACGTGCGTCG
CGCATCGACG AAAACCTGTC GCGCCTCGGC AAGCGCGCGA GCATCGTCGT GGGCGACGCG
AGCCGCCCCG GCGACTGGTG GGATGGCCAG CAGTTCGACC GCATCCTGGC CGACGTGCCG
TGCTCCGCAT CGGGCATCGT GCGGCGCCAC CCCGATATTC GCTGGCTGCG CCGTGAAGCC
GATATTGCCC GGCTTGTCAA TGAACAGCGG CGCATCGTTT CGCAACTCTG GCCGCTGCTC
AAGCCTGGCG GCATTCTGGT CTATGTCACC TGTTCTATTT TCCCAACGGA AGGGGAGGAG
CAGGCGCGCT GGTTTGGTGC ACAGTTGGCA GATGCGATAC GATTGCAGGC GCCGGGGCAG
CTGCTGCCCG GCACGCATGC AACACAGCCT GCCGGCGACA ACCATGCTGG CCAGGTCAGC
CTGCCATCTG ATCATGATGG CTTCTTCTAC GCCCGCTTCC AGAAACGCGC CTGA
|
|---|
| Protein sequence | MRLPHESLAF QMLGAAMAVR AVNEGTALPQ AIEDTAAHLR LDRVRDAATR GAVQDLAYRT
MRQFGTARAL VTELVTRPPG AQVDSLLAVA LSLLLEGEEG DAAKAGRGGY NAFTVVDQAV
SAAASEPKTA HARGLVNAVL RRFLRERKAL LAEVSRDDQA RWNLPEWWLR MLREAYPDQW
TALAESANVR PPMTLRVNTA RIPLQQYLTD LANAGLAGQA IGTQAVRLVR AVPVSQVPGF
DRGDVSVQDA GAQLAAPLLE VADGMRVLDA CAAPGGKTGH LLELADIDVT AVESDAQRAS
RIDENLSRLG KRASIVVGDA SRPGDWWDGQ QFDRILADVP CSASGIVRRH PDIRWLRREA
DIARLVNEQR RIVSQLWPLL KPGGILVYVT CSIFPTEGEE QARWFGAQLA DAIRLQAPGQ
LLPGTHATQP AGDNHAGQVS LPSDHDGFFY ARFQKRA
|
|---|
| |