Gene Reut_A3186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_A3186 
Symbol 
ID3612132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007347 
Strand
Start bp3486352 
End bp3488199 
Gene Length1848 bp 
Protein Length615 aa 
Translation table11 
GC content66% 
IMG OID637692603 
ProductATP-dependent DNA helicase RecQ 
Protein accessionYP_297390 
Protein GI73542870 
COG category[L] Replication, recombination and repair 
COG ID[COG0514] Superfamily II DNA helicase 
TIGRFAM ID[TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCAAG CACTGGCGAT CCTCAAGGAT GTATTCGGCT ACCACGCCTT CCGTGGCCGC 
CAAGGCGAGA TCATCGACCA TGTCGCGACG GGCGGCGACT GCCTGGTGCT GATGCCCACT
GGCGGCGGCA AGTCGTTGTG CTACCAGATT CCGGCGCTGC TGCGCCAGCG CGCAGGCGAG
GGCGTAGGCA TCGTGGTGTC GCCGCTGATC GCGCTGATGC AGGACCAGGT TGCGGCGCTG
ACCGAGGCCG GCGTACGCGC CTCGGTGCTC AATTCGACGC TGACCAGTTC GGAGGCCTCG
GCGGTCGAAC GCGATCTGCT GGCTGGCAGG CTCGAAATCC TCTATGTCGC GCCCGAGCGG
TTGATGACCC CGCGCTTTCT CGATCTCCTC GGACGTGCCC GCGTCGGCCT GTTCGCGATC
GACGAGGCGC ATTGCGTGTC GCAGTGGGGC CACGATTTCC GGCCGGAGTA CATCCAGCTG
TCGGTATTGC ACGAGCGCTT CCCGGATGTG CCGCGCATCG CGCTGACGGC GACGGCCGAT
GCGCTGACGC GCGACGAGAT CATCGAACGG CTAGCGCTCG ACGATGCACG TGTCTTTATC
TCGAGCTTCG ACCGTCCCAA TATCCGCTAC CGGATCGTCG AAAAGGACAA CGCGCGCCAG
CAACTGCTCG CCTTCATCAA GGCGGAGCAC ATGGCCGCCG ATGGCACGCA TGACAGCGGC
ATCGTCTACT GCCTGTCGCG CAAGAAGGTC GAGGACACCG CCGAATGGCT GCAAGGCCAT
GGTCTCAATG CGCTGCCGTA CCACGCTGGC ATGGATCCGG GCACGCGCCA GCGCCATCAG
GCGCGCTTCC GCGAAGAGGA AGGCCTGGTG ATGGTCGCGA CGATCGCTTT CGGCATGGGC
ATCGACAAGC CCGACGTGCG TTTCGTCGCC CATCTGGACC TGCCCAAGAG CATGGAGGGG
TACTACCAGG AAACCGGCCG TGCCGGGCGC GACGGGTTGC CTGCCAATGC CTGGATGGCC
TATGGTCTCG GCGACGTGGT CCAGCAGAAA CGCATGATCG ACGAGTCCGA GGCCGACGAC
GCGTTCAAGC GCGTCTCGTC GTCGAAGCTC GATGCGCTGC TCGGCCTGTG CGAAACCGCA
GGCTGCCGGC GCGTGCGCAT CCTGGCCTAC TTCAACGAAA CCAGCGAGCC CTGCGGCAAT
TGCGACACGT GCCTGGAGCC GCCTGCCACG TGGGACGGCA CGCGCGAGGC GCAGATGGCG
CTGTCGTGCG TGTACCGTAC GGCGCAGGCG AGCCGGGTGC ACTTCGGCGC CACCCACCTG
ATCGATGTGC TGCGTGGGAA TGCGTCGGAG AAGATCAAGC AGTGGGGCCA TGACAAGGTC
TCGACCTTCG GCATTGGCAA GGACCGCTCG GTCCACGAAT GGCACACGGT GTTCCGGCAG
CTGATTGCGC AGGGATGGCT GATGATCGAC CACGGCGGCC ACGGCGCGCT GCTGCTCGGC
GAGGGTGCGC GCGAAGTGCT GAAGGGCGAG CGCCAGATCA TCCTGCGCCG GCAGGCCTCC
AAGCCGGGCA AGTCTGGCGA GCGCGCTGCG CGCGGCGCGC GTACCGACCA TACGGCGGAT
ATGGATGCCG ACACGCTTGC GAACTGGGAA GCGCTGCGCC GGTGGCGCAC CGAGGCCGCA
CGCGAGCACG GCGTGCCGGC CTATGTGATC TTCCACGATG CCACCTTGGC CGAACTGGCC
CGCACGGCGC CGGGGTCGCT GTCGGCCATG GAGGGCATTC CCGGTATTGG TGCATCCAAG
CTCGAGCGTT ATGGGCAGGC GATCGTCGAC ACCCTGAGCA GGGTGTAA
 
Protein sequence
MSQALAILKD VFGYHAFRGR QGEIIDHVAT GGDCLVLMPT GGGKSLCYQI PALLRQRAGE 
GVGIVVSPLI ALMQDQVAAL TEAGVRASVL NSTLTSSEAS AVERDLLAGR LEILYVAPER
LMTPRFLDLL GRARVGLFAI DEAHCVSQWG HDFRPEYIQL SVLHERFPDV PRIALTATAD
ALTRDEIIER LALDDARVFI SSFDRPNIRY RIVEKDNARQ QLLAFIKAEH MAADGTHDSG
IVYCLSRKKV EDTAEWLQGH GLNALPYHAG MDPGTRQRHQ ARFREEEGLV MVATIAFGMG
IDKPDVRFVA HLDLPKSMEG YYQETGRAGR DGLPANAWMA YGLGDVVQQK RMIDESEADD
AFKRVSSSKL DALLGLCETA GCRRVRILAY FNETSEPCGN CDTCLEPPAT WDGTREAQMA
LSCVYRTAQA SRVHFGATHL IDVLRGNASE KIKQWGHDKV STFGIGKDRS VHEWHTVFRQ
LIAQGWLMID HGGHGALLLG EGAREVLKGE RQIILRRQAS KPGKSGERAA RGARTDHTAD
MDADTLANWE ALRRWRTEAA REHGVPAYVI FHDATLAELA RTAPGSLSAM EGIPGIGASK
LERYGQAIVD TLSRV