Gene Reut_A3131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_A3131 
Symbol 
ID3611317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007347 
Strand
Start bp3441034 
End bp3443154 
Gene Length2121 bp 
Protein Length706 aa 
Translation table11 
GC content64% 
IMG OID637692548 
Producttype II and III secretion system secretin 
Protein accessionYP_297335 
Protein GI73542815 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4796] Type II secretory pathway, component HofQ 
TIGRFAM ID[TIGR02515] type IV pilus secretin (or competence protein) PilQ 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCTGG GTCGCTGGTA CCGAGCGCTT GCAGGCGCAA TGACGATGAC ACTTGTGCTG 
GCCGCCCCGG CGGCGCTCGC ACAGGGCAAC CAGGTGAAGT CGGTCGACGC CAATGTGGTG
GGCGAGCAGA CCCTGTTCAC CATCGACCTG CAGTCGCCGC CGGCGCAGAA GCCGGCGGAC
TTCACAACGC AGAATCCGGC TCGCATCGCG ATCGATTTCT TCGATACCGG GTTTGCCGCC
GGCCGCGCTC AGTATGACTA CGCCGGCAAG CTGCTGCGCG GGGCGAGTGT CATGCAGATC
GGTGACCGCA CCCGCGTGGT GCTCGACCTG ACGCGCACGG CGACTTACCG GACCGAGGTC
CGCGGCAACC AGTTCCTGGT GCTGCTCGAC AATGTCGCGC CTGCTGCCAG GGCGGCCGCG
CCGACCTTTG CCGCGCCTGC CGCACCGACC GCGGTCGCCG CGGCACGTGC GTCCGTGCGC
AACATCGACT TCCGGCGGGG CACGGATGGC GCGGGACGCG TGGTGGTGGA CCTGTCCTCG
CGTGATTCGG GCATCAATAT CGCGCAGCAA GGCCAGAACG TGGTGGTCGA TTTCCTGGGC
ACCTCGCTGC CCGAGAACCT GCGCCGTCGT TTCGACGTGA GCGACTTCGG CACGCCGGTG
CAGGGCATGC GCGCCACGGA CGCCAGCGGC AATACCCGCC TGACCATCGA GCCGCGCGGC
AACTGGGAGT ACAGCTCCTA CCAGACCGAC ACGCAGTTCG TGGTGGAAGT ACGGCCGATC
AAGGAAGACC CGGCCAAGCT GATCAGCGGC CCGGGTTACC GTGGCGAGCG CCTGTCGCTC
AACTTCCAGA ACATCGACAT CCGCTCGCTG CTGCAGGTGT TTGCCGATTT CACGAACCTG
AACATCATTA CGAGCGACAC CGTACAGGGC AATATCACGC TGCGTCTCAA GGACGTGCCG
TGGGACCAGG CGCTGCAGAT CGTGATGGAT GCCAAGGGGC TGGCGTCGCG ACGCAATGGC
AATGTGCTGT GGGTGGCGCC CAAGGCTGAA CTGGCCACCA AGGAGAAGCT GGAGTTGGAG
GCGCAGCAGC AGATCAATGA ACTCGAGCCG ATCCGCAGCC AGGTGTTCCA GCTGAACTAC
CAGCGCGCCG AGGATGTGCG CAAGATGCTG CTCGGCATCA CCACGGGCGG TGCCGCAGGC
GCGGCGGTCC CGGCTGTCGG CATCGGCGGC GCGGCCGGCG TGGCTTCGCG CATGCTGTCC
AAGCGCGGTT CGCTGACTGC CGATGCCCGC ACCAACCAGC TGTTCGTGTC GGACATCGCC
AGCAAGCTGG AAGAGGTGCA GGGGTTCCTG AACAAGATCG ACATCCCGGT GCGCCAGGTG
ATCATCGAGG CGCGCATCGT CGAGGCCACC GACACGTTCA GCCGTAACCT CGGCGTAAAG
CTCGGCTTTG CCGGCCAGTA CAACAACGCC CGGGTCGGCA ACACGTACAG CAACGTGCTG
CCTGGCGCGA ATTCCGATAA CGGGCCGTTC CTGAGCCTGC CGGCCGGAGC GATCAACGGT
ACGAACCCGG CGAACATCGC GGTCAGCATC TTCAATAGCG CCGCCACCCG GTTCCTGGCG
CTCGAACTCT CGGCGCTGGA AGCGGATGGC AAGGGCAAGA TCATTTCCAG CCCGCGCGTG
GTCACAGCTA ACAACATCAA GGCGCTGATC GAGCAAGGTA CGGAACTGCC TTACCAGGCA
GCCACGTCCA GTGGCGCCAC CTCGGTGCAG TTCCGCAAGG CCAACCTGAA GCTGGAAGTG
ACGCCCCAGA TCACGCCGGA AGGCAATGTG CTGCTCGACG TGGATGTGAA CAAGGACAGC
GTGGGCATCC AGACGACCTC GGGCTTCGCC ATCGATACCA AGCACGTGCA GACCCAGGTG
CTGGTAGACA ATGGCGGCAC AGTGGTCATC GGCGGTATCT ATACGCAAAC GGAAAGCACG
GATGTGGACA AGGTGCCGTT CCTGGGCGAT ATCCCTGTGC TCGGCTATCT GTTCAAGAAC
AACGCGAAGG TGCGCAACCG CACCGAACTG CTGGTGTTCC TGACGCCGCG TGTCCTGAAC
GAGAGCGTTA CGCTGAAATG A
 
Protein sequence
MTLGRWYRAL AGAMTMTLVL AAPAALAQGN QVKSVDANVV GEQTLFTIDL QSPPAQKPAD 
FTTQNPARIA IDFFDTGFAA GRAQYDYAGK LLRGASVMQI GDRTRVVLDL TRTATYRTEV
RGNQFLVLLD NVAPAARAAA PTFAAPAAPT AVAAARASVR NIDFRRGTDG AGRVVVDLSS
RDSGINIAQQ GQNVVVDFLG TSLPENLRRR FDVSDFGTPV QGMRATDASG NTRLTIEPRG
NWEYSSYQTD TQFVVEVRPI KEDPAKLISG PGYRGERLSL NFQNIDIRSL LQVFADFTNL
NIITSDTVQG NITLRLKDVP WDQALQIVMD AKGLASRRNG NVLWVAPKAE LATKEKLELE
AQQQINELEP IRSQVFQLNY QRAEDVRKML LGITTGGAAG AAVPAVGIGG AAGVASRMLS
KRGSLTADAR TNQLFVSDIA SKLEEVQGFL NKIDIPVRQV IIEARIVEAT DTFSRNLGVK
LGFAGQYNNA RVGNTYSNVL PGANSDNGPF LSLPAGAING TNPANIAVSI FNSAATRFLA
LELSALEADG KGKIISSPRV VTANNIKALI EQGTELPYQA ATSSGATSVQ FRKANLKLEV
TPQITPEGNV LLDVDVNKDS VGIQTTSGFA IDTKHVQTQV LVDNGGTVVI GGIYTQTEST
DVDKVPFLGD IPVLGYLFKN NAKVRNRTEL LVFLTPRVLN ESVTLK