| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A3006 |
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| Symbol | |
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| ID | 3612012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia eutropha JMP134 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007347 |
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| Strand | - |
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| Start bp | 3302354 |
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| End bp | 3303940 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637692417 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_297210 |
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| Protein GI | 73542690 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.165169 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCTTC GCACAATCAA GAAGGCATTT GGTGCTGTCG CGGTAGCCGG GGCCATGAGC
CTTGTGCTGG CCGGCGCGGC ACAGGCCGCT GACCTCAAGC TTGCCATGAG TTCGCCGCCG
ACCTCGATGG ATCCGCACTT CTACAATCTG TTTTCGAACA TCAACGTGTC TGAACACGTG
TTCGAGACGA TGATCAAGAT GGACCCCGAC AGCCGCATCA TTCCCGGCCT CGCGGAGTCG
TGGAAGATGA TCAACAACCT GACCTGGGAA TTCAAGATCC GCAAGGGCGT GAAGTTCCAT
GACGGCTCCG AGCTGACCAC CGAGGACATC GTCTGGTCGC TGGACCGGCC GGCCACCATT
CAGAACAGTC CCGGCAAGTT CGACGTCTAC ACCAAGGCGA TCATCAACAA GAAGGTGATC
GACAAGTACA CCATCCAGCT CACTACCAAC CAGCCGTATC CGCTCATGCT GAACGACCTC
ACGTCGATCT TCGTCGTGCA GAAGAAGGCC ACGCAAGGGT TGAGTTCGGA TGACTTCGCC
CAGGGCAAGG GCATGATCGG CACCGGCCCG TTCAAGTTCG TGAGCTACGC GCGCGACGAC
CGGGTCGAAC TGGTGCGCAA TCCCGATTAC TGGGGCCCGA AGCCCGCGTG GGACAAGGTG
ACGCTGCGCT TCATTCCCAA TCCGGCCACG CGCCTCGCGG CGCTGCTGTC CGGTGATGTG
CAGGCGATCG AGAACGTGCC GACGCCGGAT CTGCCGAAGG TGCGCAACGA TCCCAAGTTG
TCGTTCTTCT CCAAGATTTC GCACCGCGTG ATCTACCTGT ACTTCGATGC CAAGCGTGAC
AAGTCGCCGT ACGTCACGAC CAAGGAAGGT CAGCCGATGG ACAAGAACCC GCTGAAGGAT
GCGCGCGTGC GCAATGCCAT CAGCATGGCC ATCAACCGGC AGGGCATCAA GGACCGACTG
ATGGAAGGCC TGTCCGAGCC GACCAACAAT CTCGTGCCGC CCACGCTGTT CGGTTATAAC
CCGAACCTCA AGACGGTCAA GTACGATCCC GAGGGCGCGA AGAAGCTGCT CGCGGAAGCG
GGGTATCCGA ATGGCTTTGG CGTGACGCTG CACACGCCTA ACAACCGCTA CGTCAACGAC
GAGAAGATTG CGCAGACCAT CGCGCAGAAC CTCACGCGCG TCGGCATCGC GACGAAGGTG
GAAGGCATGC CGATGGCGAC GTATTCGTCC AAGGGCATCA AGCACGAATG GTCGTTCGGC
TTGCTCGGCT GGGGCGCACA GACCGGAGAA GTCAGCTCGC CGCTGCGCGC GCTGCTGGCG
TGCGAGGACA GCAAGAAGGG CTTCGGCACC ACTAACTGGG GCGAATATTG CAATCCGAAG
ATGGATGTGG TGCTGGAGAA GGCGCTGGCC ACGGTCGATG ACAACGAGCG TTCCAAGCTG
CTGCAGGAAG CCACTGCCAT TGCTATCAAC GACGGCGGTA TCATCCCGAT CCACCAGCAG
GTGACCACCT GGGCCACGCA GAAGGGTATC GTCTATATTC CGCGCACCGA CGAACGCACC
TATGCGCACA ACTTCAAGCC GCAGTAA
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| Protein sequence | MSLRTIKKAF GAVAVAGAMS LVLAGAAQAA DLKLAMSSPP TSMDPHFYNL FSNINVSEHV
FETMIKMDPD SRIIPGLAES WKMINNLTWE FKIRKGVKFH DGSELTTEDI VWSLDRPATI
QNSPGKFDVY TKAIINKKVI DKYTIQLTTN QPYPLMLNDL TSIFVVQKKA TQGLSSDDFA
QGKGMIGTGP FKFVSYARDD RVELVRNPDY WGPKPAWDKV TLRFIPNPAT RLAALLSGDV
QAIENVPTPD LPKVRNDPKL SFFSKISHRV IYLYFDAKRD KSPYVTTKEG QPMDKNPLKD
ARVRNAISMA INRQGIKDRL MEGLSEPTNN LVPPTLFGYN PNLKTVKYDP EGAKKLLAEA
GYPNGFGVTL HTPNNRYVND EKIAQTIAQN LTRVGIATKV EGMPMATYSS KGIKHEWSFG
LLGWGAQTGE VSSPLRALLA CEDSKKGFGT TNWGEYCNPK MDVVLEKALA TVDDNERSKL
LQEATAIAIN DGGIIPIHQQ VTTWATQKGI VYIPRTDERT YAHNFKPQ
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