| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A2707 |
|---|
| Symbol | |
|---|
| ID | 3611214 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | + |
|---|
| Start bp | 2969655 |
|---|
| End bp | 2971349 |
|---|
| Gene Length | 1695 bp |
|---|
| Protein Length | 564 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637692118 |
|---|
| Product | YidE/YbjL duplication |
|---|
| Protein accession | YP_296912 |
|---|
| Protein GI | 73542392 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2985] Predicted permease |
|---|
| TIGRFAM ID | [TIGR01625] AspT/YidE/YbjL antiporter duplication domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTGC TTTCAGACTT GCTTGCCTCC CAACCGGAGA TCGCGCTCTT CCTCGCGCTC
GCGGTCGGCC ATGCGATTGG CGCGATCCGT TTCGGGCCAT TCCAGCTCGG CGGCATCTGC
GGCACGCTGA TCGCCGCGCT CGTGATCGGG CAAAGCGGGG CGCGTCTCGA CAACGACGTC
AAGAACGTTG CCTTCGCGGT GTTCATCTTT GCGCTCGGCT TCACCGGTGG CCCGCAGTTC
TTCGCCAATG TCGGGCGCGA ATGGCGCATC GGATTGCTCT CGCTCGTGGA AGCCTTTGTA
CTCCTGGCAC TGCTTGCGAT CGCCGTACCG TTGCTGAGCC TGGACCAGGG TACGGCCGCC
GGCCTGCTCG CCGGCGCCGC GACCGAATCG GCCGTGATCG GCACCGCTTC CGAAGCGATT
TCCCGGCTCG GCATCTCTTC CGAGCAGGTG CGCGTGCTGC AGACCAATAT CGTCACCGCA
TACAGCGTGA CGTACCTGTT CGGCCTGATC TCGATCGTGC TGTTCACGAG CCAGCTCGCG
CCGTGGCTGT TGCGCGTGAA CCTGCGCGAA TCGGCGGAAA GGCTGTGGCA GAAGCTCGGC
GGCGAGAACG ACTTGGGCGA AGGCCAGAGC AGCGCACTGC CGTTGCTGGT CGGTCGCGTG
CTGCGCGTGG AACGCGTCGC GGGCAAGACG GTGCTGGAAG CGGAGCAACT GGTCGCGCTC
GGCGCAACGA TACGGCGCGT GCGGCGCGAT GGCGAGACCT TCCGGCCATC GCCCGCCGAG
TTGCTGCGCA CCGGTGACGT TGTGCTCGCA GTCGGCCGGC GCGATGCAAT GGTGGCCTTC
GCCGGCTACG TCGGCACCGA GTTGCCTGAA GAGCCCGGCA TGGAAGCCGT GCAGAACGAG
CAGGACGTGC TGCTCACGCG GCGCGAGATC CGCGGACTGA CGCTGGCCCG GCTGCGCCAG
ATGGCCGACG TCGGCATGGG CCGCGGTGTC TATATCCAGC GTATCTCGCG CATGCAGCAC
CGGGTGCCCA CGCTGCCGGA AACGGTGCTC GAGCGTGGAG ACGTACTGAC GCTGAGCGGA
CCGCAGGAAG CCGTGCAGCG AGTGGTGCCG GAACTCGGCT ACGCGGTCAC GCCGACGATC
AAGACGGATT TCGTGTTCCT GGGCATCGGC GTGCTGCTAG GCATGCTGAT CGGTGCGTTC
AGCGTCAAGT TCGGTCAGGC CGATCTCACG CTGGGGACCG GCGGCGGCTG CCTCGTGTCG
GGCCTGATCT TCGGCTGGCT GCGCGCGCGC ATGCCGCTGT TCGGCTCGCT GCCCTCCTCC
GCGGCCGAGA TCCTGAAGGA CTTCGGCCTC GCTACGTTCA TTGCCGCAGT CGGCCTGTCC
GCCGGACCCG ATGCGATCAC GCTCATCCGC GAGTACGGCC TGATCCTGCC CGTTGCGGGC
ATCCTGGTTT CCGTGGTGCC GGCCGCGATT TCGCTGTTCA TCGGCCACCG CTGGCTGAAG
CTGGACACGC CGATCCTGCT CGGCGCCGTC GCAGGCCAGC ACTGCAGCAC GCCGACGATC
ATGGCGCTGA CCAGCGCGGC CGGCAATGGC ACCCCGGTGA TCGGCTACAC GATCACGTAT
GCGATTTCCA ATGTTCTGCT TCCGCTGCTG GGGCCGATTT CCGTGGCCAT GGCGGGCGCC
CTGGCGAGGC ACTGA
|
|---|
| Protein sequence | MELLSDLLAS QPEIALFLAL AVGHAIGAIR FGPFQLGGIC GTLIAALVIG QSGARLDNDV
KNVAFAVFIF ALGFTGGPQF FANVGREWRI GLLSLVEAFV LLALLAIAVP LLSLDQGTAA
GLLAGAATES AVIGTASEAI SRLGISSEQV RVLQTNIVTA YSVTYLFGLI SIVLFTSQLA
PWLLRVNLRE SAERLWQKLG GENDLGEGQS SALPLLVGRV LRVERVAGKT VLEAEQLVAL
GATIRRVRRD GETFRPSPAE LLRTGDVVLA VGRRDAMVAF AGYVGTELPE EPGMEAVQNE
QDVLLTRREI RGLTLARLRQ MADVGMGRGV YIQRISRMQH RVPTLPETVL ERGDVLTLSG
PQEAVQRVVP ELGYAVTPTI KTDFVFLGIG VLLGMLIGAF SVKFGQADLT LGTGGGCLVS
GLIFGWLRAR MPLFGSLPSS AAEILKDFGL ATFIAAVGLS AGPDAITLIR EYGLILPVAG
ILVSVVPAAI SLFIGHRWLK LDTPILLGAV AGQHCSTPTI MALTSAAGNG TPVIGYTITY
AISNVLLPLL GPISVAMAGA LARH
|
|---|
| |