Gene Reut_A2644 details

Gene Information

• Locus tag: Reut_A2644
• ID: 3611283
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia eutropha JMP134
• Kingdom: Bacteria
• Replicon accession: NC_007347
• Strand: +
• Start bp: 2899589
• End bp: 2901490
• Gene Length: 1902 bp
• Protein Length: 633 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 637692054
• Product: type II and III secretion system protein:transport-associated
• Protein accession: YP_296849
• Protein GI: 73542329
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG4964] Flp pilus assembly protein, secretin CpaC

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.2628
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACCAGA AACGATCCGA AGCCGCCGGC GGCACCCGCA TCCTGGTGCT GGCTGCCATC 
CTCTGCACAC CGCTGGCCGC CGCGGCGCAG GTCGCCGTGG AGGCCGGGAA CCTGACGAAG 
GCCACCTCGC CTGCAGCCGC CAAGGCGCCC CAGGCCCCGA TGCAGATGAC CATCAGCATG 
GCGCCAGCCG GCACCGCACC GGTCGGTGCC GCCGCGCCGG TGCCGGTCGC CGATGCCCGC 
GGCCCCAATT GCACCGGCGC GGTCCGCCAG GAATCGAGCG TGATTGTCCC GGTCGGCAAG 
TCCCAGCTGA TCACGCTGCA GGAGCCGGTA AAGAATCGCA CGCTGGGCAA CCCGAACGTG 
GTGCAGGCCA CGATGGTATC GGCACAGACG CTCTACGTAC TGGGCCGCAC GGTGGGAACC 
ACCAACATGA TCGTGCAGGG CCGCAGCGGC AGCTGCAGCA TCATCAACGT GGTGGTGAAC 
GCCGACGCCG GCGGACTGCA GACATCGCTC AGCCAACTCC TGCCCGGTGA ACCGGGCATC 
CGCGTGATGA CTGCCGCGGA CAACCTGGTG CTGACAGGCA GTGTCACCAA TGCGCAATCG 
GCCCTGCAGG CCATGGATAT TGCACAGGCC TATGCCAATG CAGCGCAGGT CGGTGCAGGC 
GGCGATGCCG GCAAGAAGGG CGGCGTGCTC AACATGCTCT CGGTCGACAC GCCGCAACAG 
GTGATGCTGG AAGTGAAGGT GGCGGAGGTC TCGAAGACGC TGCTGAATCA ACTTGGCTCG 
TCGGTGAACC TGCAAGGCGG CTTCGGCTCG TGGACCGGCG GACTGGTGAC ATCGTTGCTG 
ACCGGCGCTT CCGGCGCGAT CTTCGGCAGC AAGGCCAACA ACAAGCCATT CAATTTTGCC 
ATCGACGCGC AGAAGAACGA CAGCCTGGTG AAGATCCTGG CCGAGCCGAA CCTCGTCACC 
ATCAGCGGGC AGGAAGCGAG CTTCCTCGCC GGCGGCAAGA TCTACATCCC GGTGGCGCAG 
GCCAACGTGC TGAATGGTGC CGGCACGGTC ACGCTGCAGG AAGAAGAGTT TGGTGTGGGA 
CTGAAGTTCA CGCCTACGGT GCTCGCAAAT GGCCGCATCC ACCTGAAGGT GGCGCCGGAA 
GTGTCCGAGC TGTCGCCTAC CGGCGCGACC GTCAGCGGCG GCACTCTGGC TGGCCAGTCC 
GTGCTTCCGC TCATCACCAC CCGCCGCGCC TCCACCACCG TGCAGATGCG TGACGGCGAA 
AGCTTTGCCA TCGGCGGCCT GCTGCAGGAC AGTGCGCGCG GTTCGCTCAA GGCGCTGCCG 
GGTGCTGGCG AAGTGCCGGT GCTGGGCACG CTGTTCCGCA GCACGCAGTA CCAGCAGGAC 
CTGACCGAAC TGGTGTTCAT CATCACGCCA CGCCTGGTCA AGCCGATGGC GACCAACAAC 
TACCCGCTGC CCACCGACAG CTTCACCACG CCTGATCCGT TCTCGCTGTA CTTCATGGGC 
AATATGGAAG GCCACCGCAA TATGCCGCCC GCTCCGGCGC CGGCCCCGTC GCAGCCAGCA 
CCAGCCGCAG CGCCCGCCCC CGCGCCGTCG GCCCCGCGTA GCGAAGCCAC CCAGGCCACG 
TCGATCTCGG CCATGCCGGA AGGCCGGCCG CTGGAGGAGC CGTCCACGGT CGCGGCTCCG 
TCCGCTGCCA CGCCCCCTGC ACCGGTCCCG GCGGCCCCCG CGTCCCCGCG GCTAGCTGCC 
GCGGCACCCA AGGCGCCCGA GGTACGCGCA CGCAGCGTGG CGGCGCTGCC GCCGCCGGAG 
GACTCCGCCG CGCGTATCGC CCGCATCGAA GCCACCGCCG CGCGCCTGGC ACAGGCGCGG 
ACGGCAGGCT CGGCCGGCGG CACCCCATCG GACAGCAACT GA 

 

Protein sequence

MNQKRSEAAG GTRILVLAAI LCTPLAAAAQ VAVEAGNLTK ATSPAAAKAP QAPMQMTISM 
APAGTAPVGA AAPVPVADAR GPNCTGAVRQ ESSVIVPVGK SQLITLQEPV KNRTLGNPNV 
VQATMVSAQT LYVLGRTVGT TNMIVQGRSG SCSIINVVVN ADAGGLQTSL SQLLPGEPGI 
RVMTAADNLV LTGSVTNAQS ALQAMDIAQA YANAAQVGAG GDAGKKGGVL NMLSVDTPQQ 
VMLEVKVAEV SKTLLNQLGS SVNLQGGFGS WTGGLVTSLL TGASGAIFGS KANNKPFNFA 
IDAQKNDSLV KILAEPNLVT ISGQEASFLA GGKIYIPVAQ ANVLNGAGTV TLQEEEFGVG 
LKFTPTVLAN GRIHLKVAPE VSELSPTGAT VSGGTLAGQS VLPLITTRRA STTVQMRDGE 
SFAIGGLLQD SARGSLKALP GAGEVPVLGT LFRSTQYQQD LTELVFIITP RLVKPMATNN 
YPLPTDSFTT PDPFSLYFMG NMEGHRNMPP APAPAPSQPA PAAAPAPAPS APRSEATQAT 
SISAMPEGRP LEEPSTVAAP SAATPPAPVP AAPASPRLAA AAPKAPEVRA RSVAALPPPE 
DSAARIARIE ATAARLAQAR TAGSAGGTPS DSN