Gene Reut_A2259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_A2259 
Symbol 
ID3610602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007347 
Strand
Start bp2492460 
End bp2493059 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content59% 
IMG OID637691664 
ProductRNA polymerase sigma factor RpoE 
Protein accessionYP_296466 
Protein GI73541946 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02939] RNA polymerase sigma factor RpoE 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.033618 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGAAC GCGAAGCCGA TCAGCTCCTA GTTGAACGCG TCCAGCAGGG CGACAAGCGG 
GCCTTTGAGC TGCTGGTGGC AAAGTACCAC CGGAAGATCA TCCGCCTGAT TTCGCGCCTG
GTGAGAGATC CCGCCGAAGT CGAGGATGTG GCGCAGGATG CCTTTATCAA GGCATATCGT
GCCTTGCCCC AATTCCGCGG GGAATCCGCC TTCTACACAT GGCTGTACCG GATCGCCGTG
AACACGGCCA AGAACTATCT GGCTACGCAG GGACGACGAC CCGAGGCGTC CACCGACATC
GATACGGAAG AGGCTGAAAC TTTTGCGGAC GGTGAGCAAC TAAGGGATAT CAATACGCCG
GAGTCGATGC TTCACACGCG CCAAGTCGCC GAAACGGTGA ACCGAGCGAT GGAAGCGTTG
CCGGAAGAGT TGCGTACCGC CATCACCCTG CGCGAGATCG AAGGCCTCAG CTATGAGGAA
ATCGCGGAGG CGATGGGTTG CCCGATCGGA ACGGTGCGTT CACGCATTTT CCGTGCGCGT
GAGGCGATTG CTGAAAAATT GCGCCCGCTG CTGGGAACGG CAGAGGGCAA GCGATGGTAG
 
Protein sequence
MSEREADQLL VERVQQGDKR AFELLVAKYH RKIIRLISRL VRDPAEVEDV AQDAFIKAYR 
ALPQFRGESA FYTWLYRIAV NTAKNYLATQ GRRPEASTDI DTEEAETFAD GEQLRDINTP
ESMLHTRQVA ETVNRAMEAL PEELRTAITL REIEGLSYEE IAEAMGCPIG TVRSRIFRAR
EAIAEKLRPL LGTAEGKRW