| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A1895 |
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| Symbol | |
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| ID | 3609780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia eutropha JMP134 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007347 |
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| Strand | + |
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| Start bp | 2077553 |
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| End bp | 2078704 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637691285 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_296104 |
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| Protein GI | 73541584 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.387687 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCCA CCCTTGCCCT CACCGAAGAC CTGATCCGCC GCCGCTCCGT CACGCCCGCG
GACGAAGGCT GCCAGGCCGT GCTGGAAACG CGCCTGAAGG CGCTCGGCTT CACGTGCGAA
GCCATTGTCA GCGGCCCCGA CGATTTCCGC GTGACCAACC TGTGGGCCGT GAAGCGCGGC
ACGCAAGGCA CGGACGGCAA GCTGCTGGCC TTTGCCGGTC ACACCGACGT GGTGCCGACC
GGCCCGCTCG AACAATGGAA CTCGGACCCG TTCGAGCCGA CGCACCGTGA CGGTCGCCTG
TATGGCCGTG GCGCAGCGGA CATGAAGACG TCGATCGCCG GCTTTGTCGT GGCGGTCGAG
GAATTCGTCA AGGCGCATCC GGCCCATGCG GGCTCGATCG CGTTCCTGAT CACCAGCGAC
GAGGAAGGCC CGGCGCACGA CGGTACCATC AAGGTCGTCG AAGCGCTGAA GGCGCGCGGC
GAACGCCTGG ACTACTGCGT GATCGGCGAA CCCACGTCGG TCGACACGCT CGGCGACATG
GTCAAGAACG GCCGCCGTGG CTCGCTGTCG GGCAAGCTCG TCGTCAAGGG CGTGCAGTGC
CATATCGCCT ACCCGCACCT GGGCCGCAAC CCGATCCACG AAGCCGCGCC CGCGCTGGCC
GAGCTGGCTG CCGAGGTATG GGACCAGGGC AACGAGTACT TCCCGCCGAC GAGCTGGCAG
ATGTCGAACA TCCACGGCGG CACCGGCGCG ACCAACGTCA TCCCGGGCCA CGTCACGATC
GACTTCAACT TCCGCTTCTC GACCGCAAGC ACGCCCGAAG GCCTCAAGTC CCGCGTGCAT
GCGATCCTGG ACAAGCACAA GCTCGAATAC ACGCTGGACT GGACGCTCGG CGGCGAGCCG
TTCCTGACCC CGCGCGGCGA CCTGTCCGAT GCGCTGTCGG CCGCCATCGA GGCCGAGACC
GGCGTCAAGA CCGAACTGTC GACCACGGGC GGCACATCCG ATGGCCGCTT CATCGCCAAG
ATCTGCCCGC AAGTGATCGA GTTCGGGCCG CCCAACGCGA CCATCCACAA GATCGACGAG
AACGTCGAAG TCCGCTTTAT CGATCCGCTC AAGAACGTCT ATCGCGGCGT GCTCGAACGG
CTCATTGCCT GA
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| Protein sequence | MTATLALTED LIRRRSVTPA DEGCQAVLET RLKALGFTCE AIVSGPDDFR VTNLWAVKRG
TQGTDGKLLA FAGHTDVVPT GPLEQWNSDP FEPTHRDGRL YGRGAADMKT SIAGFVVAVE
EFVKAHPAHA GSIAFLITSD EEGPAHDGTI KVVEALKARG ERLDYCVIGE PTSVDTLGDM
VKNGRRGSLS GKLVVKGVQC HIAYPHLGRN PIHEAAPALA ELAAEVWDQG NEYFPPTSWQ
MSNIHGGTGA TNVIPGHVTI DFNFRFSTAS TPEGLKSRVH AILDKHKLEY TLDWTLGGEP
FLTPRGDLSD ALSAAIEAET GVKTELSTTG GTSDGRFIAK ICPQVIEFGP PNATIHKIDE
NVEVRFIDPL KNVYRGVLER LIA
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