| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A1892 |
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| Symbol | dapD |
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| ID | 3609571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia eutropha JMP134 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007347 |
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| Strand | + |
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| Start bp | 2075861 |
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| End bp | 2076688 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637691282 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
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| Protein accession | YP_296101 |
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| Protein GI | 73541581 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.648491 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGCAAG CTCTGCAAGC CCTGATCGAC CAGGCCTGGG AAGACCGCAC CAGCCTGTCG
CCGAAGTCCG CCCCCGCCGA TATCCGCGAG GCTGTCGCCA ACGTCATCGG CCAGCTCGAC
GCCGGCACGC TGCGCGTGGC CGAAAAGCAA GGCAAGGACT GGATCGTCAA CCAGTGGGTC
AAGAAGGCCG TGCTGCTGTC GTTCCGCCTG GAAGACAACG CGCCCATGAG CGCAGGCGGC
TTCGCCCAGT TCTACGACAA GGTGCCGACC AAGTTCGCCA ACTGGAGCGG CGACGACTTC
GCCAAGGCCG GCTTCCGCGT GGTGCCGCCC GCTGTGGCAC GCCGCGGTTC GTTCATCGCC
AAGAACGCCG TGCTGATGCC GTCGTACGTG AACATCGGCG CCTACGTCGA TGAAGGCACC
ATGGTCGACA CCTGGGCCAC CGTCGGTTCG TGCGCGCAGA TCGGCAAGAA CGTCCACCTG
TCGGGCGGCG TGGGCATCGG CGGCGTGCTG GAGCCGCTGC AGGCCAACCC GGTCATCATC
GAAGACAACT GCTTCATCGG CGCACGTTCG GAAGTCGTGG AAGGCGTGAT CGTCGAAGAG
AACTCGGTCA TCTCGATGGG CGTGTACCTG GGCCAGTCGA CCAAGATCTA CGACCGCGAA
ACCGGCGAGA TCCACTATGG CCGCGTGCCG GCCGGCTCGG TTGTGGTCGC GGGCAACCTG
CCGTCCAAGG ATGGCAAGTA CAGCCTGTAC TGCGCCGTGA TCGTCAAGAA GGTCGACGCG
CAGACCCGCG CCAAGACCAG CCTGAACGAC CTGCTGCGCG GCGACTGA
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| Protein sequence | MTQALQALID QAWEDRTSLS PKSAPADIRE AVANVIGQLD AGTLRVAEKQ GKDWIVNQWV
KKAVLLSFRL EDNAPMSAGG FAQFYDKVPT KFANWSGDDF AKAGFRVVPP AVARRGSFIA
KNAVLMPSYV NIGAYVDEGT MVDTWATVGS CAQIGKNVHL SGGVGIGGVL EPLQANPVII
EDNCFIGARS EVVEGVIVEE NSVISMGVYL GQSTKIYDRE TGEIHYGRVP AGSVVVAGNL
PSKDGKYSLY CAVIVKKVDA QTRAKTSLND LLRGD
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