| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A1886 |
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| Symbol | |
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| ID | 3609565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia eutropha JMP134 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007347 |
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| Strand | - |
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| Start bp | 2065205 |
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| End bp | 2067340 |
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| Gene Length | 2136 bp |
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| Protein Length | 711 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637691276 |
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| Product | NAD-dependent DNA ligase |
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| Protein accession | YP_296095 |
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| Protein GI | 73541575 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0136067 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCAA CCCATCGCGG TGCGCAGGCC GATGCCTCCG CGCCGGCTGG CGGCTTGCCG
CCCGCAACTG CCGCGGAACG CGTGCAATGG CTGCGCGACG AGCTGGACCG CCACAACTAC
CAGTATTACG TGCTCGACGC ACCGACCATT CCGGATGCCG AGTACGACGC GCTATTCACC
GAACTGCAGG CACTCGAAGC CGAGCATCCC GAACTGCTGA CGCCCGATTC GCCGACGCAA
CGCGTGGGCG GCGCGCCGCT GTCGGCCTTT GATACGGTAC GCCACCGCGT GCCGATGCTG
TCGCTGAACA ACGGTTTCTC CGACGAGGAC GTCACCGGTT TTGACCGACG CTGCGCGCAA
GGACTCGGGC GCAGCGCCGC AGCAGGCGGC GAGCAGGACT TGTTCAGCGC CGCGGAAGGG
GTGGAATACG CATGCGAGCT GAAATTCGAC GGCCTGGCCA TGTCGCTGCG CTACGAAGAC
GGTCGCCTGG TGCAGGCGGC CACGCGCGGC GACGGTGAAA CCGGTGAAGA CGTGACCGTC
AATGTGCGCA CCATCAAGGC GATTCCGCTG AAGCTGCGCG GCGCGGCGCC TGCGGTGCTC
GAGGTGCGCG GCGAAGTCTT CATGTACCGC CGGGATTTCG ACAAGCTCAA TGCGCGCCAG
GCCGAGGCCG GCGATAAGAC GTTCGTCAAT CCGCGCAATG CCGCGGCCGG CAGCCTGCGG
CAGCTGGATC CGCGCATTAC CGCGAAGCGT CCGCTTTCGT TCTTCGCATA TGGCCTCGGT
GAGTTGCAGG GCATCGAACG TCCGGCTACT CACAGCGCGA TGCTCGATGG CTTTGCGACC
ATGGGCCTGC CCGTCTGCAA CGAGCGCGCG GTGGTGAAAG GCGCACAAGG CCTGCTCGAT
TTCTACCGCA AGGTGGGCGA GAAGCGCGAC CAGTTGCCGT ATGACATCGA TGGCGTGGTC
TACAAGGTCA ACGCGCTGGC CGAGCAGGAA CAGCTTGGCT TCGTGTCGCG CGCGCCGCGC
TTCGCGCTCG CGCACAAGTT CCCGGCGCAG GAGATGACCA CCATCGTCGA GGACATCGAA
GTGCAGGTCG GCCGCACCGG TGCCATTACG CCTGTCGCGC GCCTGCAGCC GGTGTTCGTC
GGTGGTGTGA CGGTGACCAA TGCCACCCTG CACAACGAGG ACGAGGTGCG CCGCAAGGAC
GTGCATATCG GCGACACCGT GATCGTACGC CGCGCCGGCG ATGTGATTCC GGAGGTCGTC
GCCGTGGTGC TGGAGCGCCG CCCCGACGAT GCGCGCGCGT TCGTGATGCC GACTGCCTGC
CCGGTATGCG GCTCGCACAT CGAGCGCCTG GAAGACGAGG CCATCGCGCG CTGCACGGGC
GGCCTGATCT GTGCGGCGCA GCGCAAGCAG GCGCTGCTGC ATTTCGCGCA GCGTCGCGCC
ATGGATATCG AAGGCCTTGG CGACAAGGTC GTCGAGCAGC TGGTCGACCA GGGCATCGTG
CGCACGCCGG CGGATCTCTA CAAACTGGGT GTGGCCAAGC TTGCCGCATT GGACCGCATG
GCGGACAAGT CGGCGGGCAA CCTCGTGGCT GCCATTGAAG CCTCGCGCAG CACCACGTTC
AACCGGTTCA TCTTCTCGCT TGGAATTCGA CACGTGGGCG AGGCTACGGC CAAGGACCTG
GCCCGCCATT TCGGCAAGCT CGACGGACTG ATGGTGGCCG ACGAGGCCGC GCTGCTTGAA
GTCAACGACG TGGGCCCTGT GGTGGCGCAG TCGATCGTCA ATTTCTTCGG CGAGCCGCAC
AACGTCGAGG TCATCGAGCA GTTGCGCGCG GCAGGCGTAC ACTGGCCGGA AAGCGAGCCC
GTCGCGCGCG CGCCGGCACC ACTCGCGGGC AAGACCTTCG TACTGACAGG CACGCTGCCG
AGCCTGTCGC GCGAGGCAGC CAAGGAAATG CTGGAGGCCG CGGGCGCCAA GGTCGCAGGC
TCTGTATCGA AGAAGACAGA CTACGTCGTG GCCGGCGCCG AGGCTGGCAG CAAGCTCGAC
AAGGCCGAGG CGCTGGGTGT ACCGGTGCTC GACGAGGCAG GAATGCTGGC GCTGCTGGAA
TCGGTCGGCG CGGGCCAACC GGGGGAGCAG TCATGA
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| Protein sequence | MNATHRGAQA DASAPAGGLP PATAAERVQW LRDELDRHNY QYYVLDAPTI PDAEYDALFT
ELQALEAEHP ELLTPDSPTQ RVGGAPLSAF DTVRHRVPML SLNNGFSDED VTGFDRRCAQ
GLGRSAAAGG EQDLFSAAEG VEYACELKFD GLAMSLRYED GRLVQAATRG DGETGEDVTV
NVRTIKAIPL KLRGAAPAVL EVRGEVFMYR RDFDKLNARQ AEAGDKTFVN PRNAAAGSLR
QLDPRITAKR PLSFFAYGLG ELQGIERPAT HSAMLDGFAT MGLPVCNERA VVKGAQGLLD
FYRKVGEKRD QLPYDIDGVV YKVNALAEQE QLGFVSRAPR FALAHKFPAQ EMTTIVEDIE
VQVGRTGAIT PVARLQPVFV GGVTVTNATL HNEDEVRRKD VHIGDTVIVR RAGDVIPEVV
AVVLERRPDD ARAFVMPTAC PVCGSHIERL EDEAIARCTG GLICAAQRKQ ALLHFAQRRA
MDIEGLGDKV VEQLVDQGIV RTPADLYKLG VAKLAALDRM ADKSAGNLVA AIEASRSTTF
NRFIFSLGIR HVGEATAKDL ARHFGKLDGL MVADEAALLE VNDVGPVVAQ SIVNFFGEPH
NVEVIEQLRA AGVHWPESEP VARAPAPLAG KTFVLTGTLP SLSREAAKEM LEAAGAKVAG
SVSKKTDYVV AGAEAGSKLD KAEALGVPVL DEAGMLALLE SVGAGQPGEQ S
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