Gene Reut_A1871 details

Gene Information

• Locus tag: Reut_A1871
• Symbol: lpxD
• ID: 3609258
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia eutropha JMP134
• Kingdom: Bacteria
• Replicon accession: NC_007347
• Strand: -
• Start bp: 2046573
• End bp: 2047661
• Gene Length: 1089 bp
• Protein Length: 362 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 637691261
• Product: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
• Protein accession: YP_296080
• Protein GI: 73541560
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
• TIGRFAM ID: [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.337496
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGACAC CCACACTGGG GCAGCTCGCC ACCGAAAACG GCGCGCAGGT TGTGGGTGAT 
CCCGACCTCG CGATCATCGG CCTGGCTCCG CTGGATCAGG CCGGTTCCGG CGAACTCTCG 
TTCCTCTCCA ATCCGCTGTA CCTTGCCCAG GCGTTGTCGT CCGCGGCTGG CGCGGTGATC 
GTGTCCGCGG CGGACCTGGA GCGCATCCGC GCCGAAGGGC AGGCCGACGG GCGCAACTGG 
CTTGTGGCGC GCAATCCGTA TGTGTGCTTC GCGCGGATTG CGCAGCGCTT CGACAAGGCC 
AACCAGGACG CGCGTACGGG TATCGATCCG CGCGCCAGCG TTGCTGCGGA TGTCACGGTT 
CCCGCTTCGT GCTTTATCGG CCCGAACGTG GTGATCGAGT CCGGTGCGCG TATCGGCGAG 
CGCGTGCGCA TCGTCGCGAA CAGCTTCGTC GGCGCGCATG CCGAGATCGG CGACGACTCG 
CTGCTGTACG CCAATGTGTC GGTCTACCAC CATTGTGTGG TCGGCGCGCG CGCGATCCTG 
CACAGCGGGG TCGTGATCGG TGCGGACGGG TTCGGCTTTG CGCCCGACAT CGGTCCCACC 
GGCGTTGAAT ACGTGAAGAT TCCGCAGACC GGCCGCGCCG TGCTCGGCAA CGATGTCGAA 
GTGGGCGCCA ATACCGCCAT CGACCGTGGC GCGATGGCCG ACACCGTGAT CGAAGACGGC 
TGCAAGATCG ACAACCAGGT CCAGATCGCG CACAACGTGC GCGTCGGCGC GCATACTGTG 
ATTGCCGGCT GCGCCGCAGT CTCGGGCAGT ACGCATATCG GCCGGTTCTG CGTGATCGGC 
GGTGCCGCGA ATTTCTCGGG GCACCTGAAG ATTGCCGACC GCACCACGGT GTCCGGCGGG 
ACTTCGATCA CCAAATCCAT TACAAAGCCC GGTGGCCACT TCACCAGCGT GTTTCCGTTC 
CTGCCACACG GCGAATGGGA GCGCAATGCC GCGATCGTGC GTGGCCTGAC CAAGCTGCGT 
GAACGCGTCA TGCAACTGGA GCGCCGCCTG CGCGGCCAGT CCGCCGGGAC CCAAACCTCA 
CAAGACTAA 

 

Protein sequence

MQTPTLGQLA TENGAQVVGD PDLAIIGLAP LDQAGSGELS FLSNPLYLAQ ALSSAAGAVI 
VSAADLERIR AEGQADGRNW LVARNPYVCF ARIAQRFDKA NQDARTGIDP RASVAADVTV 
PASCFIGPNV VIESGARIGE RVRIVANSFV GAHAEIGDDS LLYANVSVYH HCVVGARAIL 
HSGVVIGADG FGFAPDIGPT GVEYVKIPQT GRAVLGNDVE VGANTAIDRG AMADTVIEDG 
CKIDNQVQIA HNVRVGAHTV IAGCAAVSGS THIGRFCVIG GAANFSGHLK IADRTTVSGG 
TSITKSITKP GGHFTSVFPF LPHGEWERNA AIVRGLTKLR ERVMQLERRL RGQSAGTQTS 
QD