| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A1807 |
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| Symbol | |
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| ID | 3609907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia eutropha JMP134 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007347 |
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| Strand | - |
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| Start bp | 1973633 |
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| End bp | 1975624 |
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| Gene Length | 1992 bp |
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| Protein Length | 663 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637691197 |
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| Product | PAS:helix-turn-helix, Fis-type:propionate catabolism activator, N-terminal |
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| Protein accession | YP_296016 |
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| Protein GI | 73541496 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR02329] propionate catabolism operon regulatory protein PrpR |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.306478 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACCGA CCGTTTCTTC CCCCGGCCTG CCACGCATCT GGGCGCTCGG CATCAGCCGT
CTGCAGCGCG CTTTCGCCGA ACTGATTCCC GCCTATTCCC ACCTTGCAGA GTTCCGCATC
GTCGGGCGCG CCTATGACTC CGCGGCCGAC GCGATCCGCC GCGAGGCGCG CGAGGGCAAG
CTCGATGTCG TCGTGTCCGG CGGCTCGAAT GGCGCCTACC TGCGCCAGCA CGTGGATGTG
CCGGTGGTGC TGGTCAAGGT TACGGGCTTC GATGTGATGA GCGCGCTCGC GACAGCGCGG
CGCATCTCGC CAAATGTGGC GCTGGTGACG CATGCGTCCA CCTATGCCGA AGTGGATGAA
TTCACGCGCG CGTTCTCGCT GTCGATTCCG GCCTACACCT ATCTGACCGA AGACGATGCG
ACCGCCCGCG TGCAGACGCT AAAGCAGGAG GGCGTAAAGG TGGTGGTCGG CCCCGGTCTG
GTGACGGACC TGGCGGACCG CCTCGGCCTG ATCGGCGTCT TTCTCTATTC CGGCAACTCC
GTGCGCATGG CGCTCGAGGA CGCGATCGAA GCGGCCCGGC TGCGGCGCAT CGAGTCCGGC
CGGCGCGACT ACGTCAACAA CATCCTCGCG CACCTGAACG AGGGCGTGGC GGCCGTCGAC
GGTGAGGGGC GCATCCAGTC GTTCAACCCG GCGATGGAAC GCTTTCTCGG CACGCCTGCC
GCGAGCGCCG TCGGGCGCAA GCTGCAGTCG CTGTCGCCGG GGCTGTCGCT GGACGATGTA
ATCCAGACTG GCGCCAAGGA ACTCGAAGCG ATCCAGAAGG TGGGCGACCG CATGGTGGTG
GTCAACCGCA TCCCGCTCGC GAATGAATCC GGCACTACGG GCGCGCTGCT GACGCTGCAG
GACGCGACGG CCATCCAGCG CGTGGACCGC AACCTGCGTT CGCGCAGCCG TACGCGCCTG
CCCGGTGTGC GCTACAGCCT GGAGGACCTG GCCGGCACGT CGGCAGCCAT GATGCACGTG
CGCGAACTTG CGCGGCGCTA TGCGTCGGTC GACTCCACCG TGCTGATTGG CGGCGAGAGC
GGTACTGGCA AAGAGGTGCT GGCACAAGGC ATGCACGACG CGAGCCCGCG CCGCGCGTTC
CCGTTCGTGG CGGTCAATTG CGCCGCGTTT CCCGAAACGC TGCTGGAAAG CGAACTGTTC
GGCTACGAGG AGGGCGCCTT CACCGGCGCG CGGCGCGGCG GCAAGGCTGG CCTGTTCGAG
TCTGCCCACA ACGGCACGCT CTTCCTCGAT GAAGTCGGCG ACATGCCGCC CGCTCTGCAG
ACGCGTTTGC TGCGCGTGCT TCAGGAAAAG CAGGTGCTGC CGATCGGCGG GCTGGAAGCT
GTGCCGGTCA ATGTGCGCGT GATCGCCGCC ACACACAGGG ACCTGGTGCA GCGCGTCAGC
GAGGGGACCT TCCGGCAGGA TCTTTACTAC CGGCTGAATA TCCTGCGCAT CGAAGTGCCG
CCGCTGCGCG CGCGCGCGGA GGACCTGCCT GAGCTGGCCG AACTGCTTTA CCGGCGCGCG
CTCGAACGGC TGGGCCTTGA GGATCACGAA GGCTTGCCGC AAGCGGCCCG CGCCCGCCTG
GCGGGCTATC ACTGGCCGGG CAATATCCGC GAACTGGAAA ACGTGACGGA GCGCATCGCC
GTGCTGGTCG CCGGCCGGCC GCTGGAACCG GCGGAATTGC TGCGCGAACT GCAGGCCGCG
GTCCCGGAAT TGTTTGGCGA TGATCTGGGC GCCATGCCTG ATGCCGCGAT CTCCGTGGAT
GAGCCCGTAC AGGAACCTAT GCGCGGTGGC CGCCAGCGTC GCGTCGGCCG TTCGCTAGCC
GGTGTTGCGC AGGCCAGCGA AGCCGAGCAT ATCCGCCGCG TGCTGGCCGA GTGCGGTGGC
GACCGCAACG CGGCGTGCCA CATCCTCGGG ATCAGCCCGA CCACGCTGTG GCGCCGGCTC
CGGGCTGCCT GA
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| Protein sequence | MPPTVSSPGL PRIWALGISR LQRAFAELIP AYSHLAEFRI VGRAYDSAAD AIRREAREGK
LDVVVSGGSN GAYLRQHVDV PVVLVKVTGF DVMSALATAR RISPNVALVT HASTYAEVDE
FTRAFSLSIP AYTYLTEDDA TARVQTLKQE GVKVVVGPGL VTDLADRLGL IGVFLYSGNS
VRMALEDAIE AARLRRIESG RRDYVNNILA HLNEGVAAVD GEGRIQSFNP AMERFLGTPA
ASAVGRKLQS LSPGLSLDDV IQTGAKELEA IQKVGDRMVV VNRIPLANES GTTGALLTLQ
DATAIQRVDR NLRSRSRTRL PGVRYSLEDL AGTSAAMMHV RELARRYASV DSTVLIGGES
GTGKEVLAQG MHDASPRRAF PFVAVNCAAF PETLLESELF GYEEGAFTGA RRGGKAGLFE
SAHNGTLFLD EVGDMPPALQ TRLLRVLQEK QVLPIGGLEA VPVNVRVIAA THRDLVQRVS
EGTFRQDLYY RLNILRIEVP PLRARAEDLP ELAELLYRRA LERLGLEDHE GLPQAARARL
AGYHWPGNIR ELENVTERIA VLVAGRPLEP AELLRELQAA VPELFGDDLG AMPDAAISVD
EPVQEPMRGG RQRRVGRSLA GVAQASEAEH IRRVLAECGG DRNAACHILG ISPTTLWRRL
RAA
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