Gene Reut_A1797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_A1797 
Symbol 
ID3609897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007347 
Strand
Start bp1962799 
End bp1963968 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content69% 
IMG OID637691187 
Productmajor facilitator transporter 
Protein accessionYP_296006 
Protein GI73541486 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAGCC TGGCCATGGG CCTGCGGCAG AGCCTGGGCA TCTTCATGCC CCCGCTGACG 
AAGGACATCG GCATCTCGGT GTCTGACTTC ACGGTGGCGA TTGCCGTGCA GAACCTGGCG
TGGGGGCTGT TGCAGCCGTT CGCAGGTGCG TGGGCCGCGC GTGTCGGCTT CCGGCCGCTG
ATGATGGGCG GCTCGCTGCT CTATGTGGTC GGGCTGGTGC TGCTGGCGAC ATCGCATGGC
CTGGCCGGCG TCACGCTTGG CGCCGGCGTG GCCATTGGCG CGTCCATGGC CTGCACGGGC
AGCGCGATCT CCATGGCCGT GGCGGCACGT CCGGTTCCGG CCGCCATGCG CAGCACCGTG
CTGGGACTGG TGTCGGGGGC GGGATCGCTG GGCGCGCTGA TTGCCGCGCC GATCGGCCAG
GTCGTAGCGC AATCGTTCGG CTGGCGCACC GGCATCGCCG CGTTCGTGCT GCTCGCACTG
GTCATGCTGC CCGCGGCCTG GTTCGCCGGA CGCGTAGACC GCCTGCCGCT GAGCGTGCCG
CACGGCACCG GCCAGGACAA CGCGCGCCAG GCCCTCGGCT CCGCGCTGCG GCACGTCCCG
TTCCTGGTCA TGGCAATGGC GTATTTCGTC TGCGGCATGC AGCTGGTTTT TCTGACCACG
CACCTGCCCT CCTACCTCGA TATCTGCGGC ATGGATCCGA TGCTGAGCGC GAAGGCGCTC
GGGGTCATCG GCGGTTTCAA CGTGCTGGGC AGCATCTTCT TCGGCTGGGC CGGCGGGCGC
GTCAACAAGC TGCTGCTGCT CGGCTGCATC TACACCATCC GCTCACTGGC GCTGACGTGG
TACTTCTCGT CGGCACCCAC GCCGACGAGC ACGCTGGTCT TCGCCGCCGT GATGGGCTTC
CTGTGGCTCG GCGTGGCACC GCTGGTTGCA GGCTGGATTG GCGAGACCTT CGGCCTGCGC
TGGCAGGCCA TGCTCGGCGG CATGGCGTTC TTCAGCCACC AGATCGGCAG CTTTGTAGGC
GCCTTCGGCG GTGGCCTGGT GTATGACGCG CTGGGTTCGT ACACGCTGGC CTGGCAGGTT
GGCGTCGGGC TTGGGCTAAC GGCGGGCCTC GCGCAGATTG CGTTTGCCGT GGCCACGCAG
CGGCGGCCGC CGGCGCTGGC GACAACGTAA
 
Protein sequence
MLSLAMGLRQ SLGIFMPPLT KDIGISVSDF TVAIAVQNLA WGLLQPFAGA WAARVGFRPL 
MMGGSLLYVV GLVLLATSHG LAGVTLGAGV AIGASMACTG SAISMAVAAR PVPAAMRSTV
LGLVSGAGSL GALIAAPIGQ VVAQSFGWRT GIAAFVLLAL VMLPAAWFAG RVDRLPLSVP
HGTGQDNARQ ALGSALRHVP FLVMAMAYFV CGMQLVFLTT HLPSYLDICG MDPMLSAKAL
GVIGGFNVLG SIFFGWAGGR VNKLLLLGCI YTIRSLALTW YFSSAPTPTS TLVFAAVMGF
LWLGVAPLVA GWIGETFGLR WQAMLGGMAF FSHQIGSFVG AFGGGLVYDA LGSYTLAWQV
GVGLGLTAGL AQIAFAVATQ RRPPALATT