| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A1552 |
|---|
| Symbol | |
|---|
| ID | 3610975 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | + |
|---|
| Start bp | 1672250 |
|---|
| End bp | 1673017 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637690940 |
|---|
| Product | Short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_295762 |
|---|
| Protein GI | 73541242 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.747318 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCAAG AAGGTAGGGT GAAGGGCAAA GTCGCCCTGG TCACCGGCGC GGCCAGCGGC
GTCGGCCGTG CGGACGCGCT GCTGCTGGCC GCAGAAGGCG CGAGGGTGGT ACTGAGCGAC
GTCAACGAAG AAGCGGGCCA GGCGCTGGCG CGCGAGATCG GTGACGCGGC GCTGTTCGTC
CGTCACGACA TCGCTAGCGA GGAGGACTGG CGCAGTGTCA TGGCGGCTGC ACTGGATCGC
TTCGGACGGC TGGACGTGCT GGTGAACAAT GCCGCGATCT GTCCGCTCGG CTCGATCGAG
GAAACCTCGC TCGAATGCTG GCGGCAGGTC ATGCGCGTCA ATGCCGATGG CTATTTCCTC
GGCTGCCGTT TCGGCGTGGC GGCGATGAAA GGCAATGAGG CCGGCGGCTC GATCGTGATG
ATGTCTTCGG TGGCAGCGCT GGGCGGCCTG CCGATGATGT GCGCGTACAC CGGTTCGAAA
GGCGCTGTCA CCGCGCTGAC GCGCAGCGTA GCGGCGCATT GCAAGCAGCA GGGCTACCGC
ATCCGCTGCA ACTCGATCCA CCCGGACGGT ATCTGGACCC CGATGACGCA GGCGCTCGTG
CCGGATCTCG ACCCGGTCGC ACTCGGTATC GGCACAGACC CGATGGCGCG CATGTGCAAC
CCTGAGGATG TCGCCAACCT GGTGCTGTTC CTCGCCTCGG ATGCATCGCG CTTCATCAAT
GGCGCTGAAC TGCGCATCGA CAATGCACAG CTGATCTCGT CGCTGTGA
|
|---|
| Protein sequence | MKQEGRVKGK VALVTGAASG VGRADALLLA AEGARVVLSD VNEEAGQALA REIGDAALFV
RHDIASEEDW RSVMAAALDR FGRLDVLVNN AAICPLGSIE ETSLECWRQV MRVNADGYFL
GCRFGVAAMK GNEAGGSIVM MSSVAALGGL PMMCAYTGSK GAVTALTRSV AAHCKQQGYR
IRCNSIHPDG IWTPMTQALV PDLDPVALGI GTDPMARMCN PEDVANLVLF LASDASRFIN
GAELRIDNAQ LISSL
|
|---|
| |