Gene Reut_A1398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_A1398 
Symbol 
ID3610304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007347 
Strand
Start bp1511136 
End bp1512761 
Gene Length1626 bp 
Protein Length541 aa 
Translation table11 
GC content62% 
IMG OID637690790 
Productlong-chain-fatty-acid--CoA ligase 
Protein accessionYP_295612 
Protein GI73541092 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATTGA TGGGTCAAAT GATGAGCGCG CCGCTGCTCA TTTCCTCCAT CATCCGGCAC 
GCTGCCCGCT ATTACGGCAG CACCGAAATC GTCTCGCGAC GTACCGAAGG CGACCTTCAC
CGCTATACCT ATCGCGATTG CGAGCTGCGT GCCCGCAAGA TGGCCCAGGC ATTAGCTGCG
CTTGGCGTGC AGCAGGGCGA TCGTGTTGGT ACCTTGGCCT GGAATGGTTA CCGGCACCTC
GAAATCTACT ATGGCGTGTC GGGCATGGGC GCCGTCTGCC ATACGATCAA CCCGCGCCTG
TTCCCCGAGC AAATTGCCTA TATCGTCAAT CACGCCGACG ATGGTTATGT GTTCTTCGAC
CTGACTTTCC TGCCGCTTGT GGAAGGCGTG GCGCCGCATT GCCCGAATGT GAAGGGCTGG
GTGCTGATGA GCGACCGTGC CCATATGCCG GCGGAGTCCA AGGGGAAGCT GCTGTGCTAT
GAAGAATTGA TCGACGCGCA GGACGGCAAC TATGATTGGC CGGACCTCGA CGAAAACCAG
GCGTCGAGCC TGTGCTACAC CTCCGGTACG ACCGGCAATC CGAAGGGCGC GCTGTATTCG
CACCGCTCGA CGGTGCTGCA TTCCTACGCG TCCGCGCTGC CCGATGCACT GGGCTGCTCG
GCGCGCGACG TGATCCTGCC GGTGGTCCCG ATGTTCCATG TCAACGCCTG GGGCCTGCCA
TATTCGGTGC CGCTCGTCGG TGCGAAGCTC GTGTTGCCTG GCCCCAAGCT GGACGGGGCT
TCCGTGTATG AGTTGTTCGA GCAAGAAAAG GTGACCTTCT CCGCCGGCGT GCCGACGGTA
TGGCTGGGCC TGCTGCAGCA TGTGCAGGCC AACAACCTGA AGTTCTCCAC CTTCCGCCGC
ACCGTGATCG GCGGGTCGGC GGTGCCACCG GCAATGATCC GCGCGCTGCG GGCGCTGGAT
GTCGAAGTCA TCCACGGCTG GGGAATGACC GAGATGTCAC CACTGGGCAC CACCTGCAAG
CTGTTGGCCA AGCACGAGGA GTTGTCCGAG GAGGCGTCCC AGAAGGTCCT TGAGAAGCAG
GGCCGCGTGC TGTTCGGGGT GGATATGAAG ATTGTCGATG GCGACGGCAA GGAGTTGCCC
TGGGACGGCA AGGCCTTCGG CGACCTGCTG GTGCGCGGTC CCTGGATCAT CGAGCGCTAC
TTCCGCAATG ACACCAATCC GCTCGTCGAC GGCTGGTTTC CGACCGGCGA CGTGGCCACC
ATCGATCCCG ACGGCTACAT GCAGATCACC GACCGCAGCA AGGACGTGAT CAAGTCCGGC
GGCGAATGGA TCTCGTCGAT CGATATCGAG AACGTGGCCG CGGCCCACCC GGCCGTGCAT
ATGGCCGCCT GCATTTCCGT GCATCACCCG AAGTGGGACG AGCGCCCGCT GCTGGTCGTG
GTGAAGAAGC CGAGCGCCGA AGTCACCAGG GAAGAGTTGC TGAAATTCTT TGAGGGCAAG
GTCGCCAAAT GGTGGATTCC TGACGACGTG GCCTTCGTCA GCGAAATCCC GCTGACCGCT
ACCGGCAAGA TGCAGAAGCT CAAGCTGCGC GACCAGTTCA AGGACTACCG CCTGCCGACA
GCCTGA
 
Protein sequence
MALMGQMMSA PLLISSIIRH AARYYGSTEI VSRRTEGDLH RYTYRDCELR ARKMAQALAA 
LGVQQGDRVG TLAWNGYRHL EIYYGVSGMG AVCHTINPRL FPEQIAYIVN HADDGYVFFD
LTFLPLVEGV APHCPNVKGW VLMSDRAHMP AESKGKLLCY EELIDAQDGN YDWPDLDENQ
ASSLCYTSGT TGNPKGALYS HRSTVLHSYA SALPDALGCS ARDVILPVVP MFHVNAWGLP
YSVPLVGAKL VLPGPKLDGA SVYELFEQEK VTFSAGVPTV WLGLLQHVQA NNLKFSTFRR
TVIGGSAVPP AMIRALRALD VEVIHGWGMT EMSPLGTTCK LLAKHEELSE EASQKVLEKQ
GRVLFGVDMK IVDGDGKELP WDGKAFGDLL VRGPWIIERY FRNDTNPLVD GWFPTGDVAT
IDPDGYMQIT DRSKDVIKSG GEWISSIDIE NVAAAHPAVH MAACISVHHP KWDERPLLVV
VKKPSAEVTR EELLKFFEGK VAKWWIPDDV AFVSEIPLTA TGKMQKLKLR DQFKDYRLPT
A