Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Reut_A1378 |
Symbol | mnmC |
ID | 3611169 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia eutropha JMP134 |
Kingdom | Bacteria |
Replicon accession | NC_007347 |
Strand | + |
Start bp | 1484119 |
End bp | 1486125 |
Gene Length | 2007 bp |
Protein Length | 668 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637690768 |
Product | 5-methylaminomethyl-2-thiouridine methyltransferase |
Protein accession | YP_295592 |
Protein GI | 161611262 |
COG category | [E] Amino acid transport and metabolism [S] Function unknown |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) [COG4121] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR03197] tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCGCG CACTCGAGCC CGCCGAGCCT ATTCTGTCTG CCGAAGGCAC TCCTTATTCT CCACGCTACG ACGACGTCTA CCACAGCACG GAAGGCGGCC TGGCGCAGGC GCATTACGTA TTCCTGGGTG GCAATGGATT GCCGCAAGCC TGGGCGGGGC GCGATCAGTT CGTGATCGTC GAGACCGGAT TCGGGCAAGG GCTGAACTTC CTGGCGACGT GGCAGGCGTG GCGTAACGAT CCGCAGCGCT GTCGCCGCCT GCACTTCGTC TCGATCGAAA AACATCCGTT CACGCGCGAG GGACTGGCGC AACTGCATGC CGGGCTTGCG GATATGTTGC CGCTCGCGCA GCAACTGCAA GCGGCCTGGC CGGATGCGCT GCCCGGCCTG CATCGGCTCG CGTTCGAGGA TGGCGGAGTG ACGCTGACAC TGGCCCTCGG AGATATCGAG GCAGTGCTGC CCAAGCTGGT GGCCGGCGCG GATGCGTTCT ACCTCGATGG CTTTTCTCCG TCGCGCAATG CGGACATGTG GTCGCCGTTG GTGTTTCGCG GCCTTGCGCG GCTCGCACGG CCGGGAGCCA CGCTGGCGAC CTATACGGCG GCGGGCTTCG TGCGCCGGGG TCTGCGGGAG GCGGGTTTCG ACGCGCGCAA GGCGCCGGGC TTCGGTGGCA AGCGGGACAT GACGGTTGCG ACGTTTTGCC CGGTATGGAA GTCGCGGCGG CATGCGCCGA CTCCTGCGCC GGAATGGAAG GTGCGACACG CTATCGTGAT TGGAGCTGGG CTTGCGGGCT GTGCCGTGAC GGAACGCCTG GCCTCGCGTG GCTGGCAGGT GACGTTGTTC GACGTACATG ACGGCCCGGC GCGGCAAACG TCGTCCCATC GTGCGGCTGC GATGCATGCG CATATCTCGT CCGACGACAG CCTGCTGTCC CGGCTGTCGC GCGCTGGCAA CCAATACGCG CTGCGTGCCT GGGCCGCGCT TGCTGGTGCG GGTCAACCGG TGGGGTGGCA TGGCTGCGGC GTGCTGCAGA TCGGCGAGAA CGAAGCAGAA GCCGAGGCGC AGCGCGCTGC GCTCGAAGCA CTCGGTCTGC CGGAGTCCTT CGTGCGCTGG ATGTCGCCGG GGGAGGCGGC ATCGCAACAC GGCGCCGGCG TGCCGCGCGG AGGGCTGTGG TTTCCGCAGG GCGGCTGGGT TGCGCCGCCC GATATCTGCA GTGCTCAGTT GCGCCGCGCG GGCGATGCCG TGCAGTCGAG GTTTGGTACG CGAGTGGAGC GCATTCGCCG CCGCGACGAC GAATGGGAAG CCATCGACGA AGATGGTGCC GTCCTGGCTT CGGCGCCCAT TCTTGTGCTG GCCAACGCTC ACGAAGCGCC GCGGCTCGCG CCGATGCGGC ACCAGGTGAT GCGACGCGTG CGCGGCCAGC TCACCACGCT CGCGCCTGGG CAAGTGACAG CGCTCGGATC GTGGCCGGAT TGCGTGGTGA CCGGTGCGGG ATACCTGCTG CCGGTGTCGG AAGATGGCAG CGCGCGGGTG GGTTCGAGCT ATGAAGCCGA CGATGGACCG CTGGTCGCGC GAACCGAAGT GCATGCGGCA AACCTTGATC GCCTGGCGGG GCTGTTGCCG CAGGCTGCTG CAGCTGCCGG CAATCTCGAT GCCGCGGCGA TGAGCGGATA TGTCGGCGTG CGCACAGTGT CACACAACCG CTTGCCGCTG ATTGGCCAGA TGCCGGACGA GGCGGCGGCG ATAGCGGCGG CTCCGTCACT GCGCGGAGCG CACTTGCGCG ACATTCCAAG GGTGCCAGGG CTTTACGCAG CGCTTGCCTA CGCGTCACGC GGCCTCACAT GGGCCGCATT GGGCGCGGAG TTGCTGGCAA GCCAGATCGA AGGCGACCCA CTGCCGCTCG AAGCCGATCT GGTAGACGCC ATCGACCCGG CGCGCCTGCT GCTGCGTGCA CTGCGTCATG GGCAGGTTGG CCGTGAAGAA GGGCATTCCA GCGGACTATC AGGGTAA
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Protein sequence | MSRALEPAEP ILSAEGTPYS PRYDDVYHST EGGLAQAHYV FLGGNGLPQA WAGRDQFVIV ETGFGQGLNF LATWQAWRND PQRCRRLHFV SIEKHPFTRE GLAQLHAGLA DMLPLAQQLQ AAWPDALPGL HRLAFEDGGV TLTLALGDIE AVLPKLVAGA DAFYLDGFSP SRNADMWSPL VFRGLARLAR PGATLATYTA AGFVRRGLRE AGFDARKAPG FGGKRDMTVA TFCPVWKSRR HAPTPAPEWK VRHAIVIGAG LAGCAVTERL ASRGWQVTLF DVHDGPARQT SSHRAAAMHA HISSDDSLLS RLSRAGNQYA LRAWAALAGA GQPVGWHGCG VLQIGENEAE AEAQRAALEA LGLPESFVRW MSPGEAASQH GAGVPRGGLW FPQGGWVAPP DICSAQLRRA GDAVQSRFGT RVERIRRRDD EWEAIDEDGA VLASAPILVL ANAHEAPRLA PMRHQVMRRV RGQLTTLAPG QVTALGSWPD CVVTGAGYLL PVSEDGSARV GSSYEADDGP LVARTEVHAA NLDRLAGLLP QAAAAAGNLD AAAMSGYVGV RTVSHNRLPL IGQMPDEAAA IAAAPSLRGA HLRDIPRVPG LYAALAYASR GLTWAALGAE LLASQIEGDP LPLEADLVDA IDPARLLLRA LRHGQVGREE GHSSGLSG
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