| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A1371 |
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| Symbol | |
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| ID | 3611570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia eutropha JMP134 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007347 |
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| Strand | - |
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| Start bp | 1475131 |
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| End bp | 1476039 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637690760 |
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| Product | squalene/phytoene synthase |
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| Protein accession | YP_295585 |
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| Protein GI | 73541065 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | [TIGR03465] squalene synthase HpnD |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.157684 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTACAAT CCCGCCGCCG CCAGGCTCTG ACGCCGCCCG CACCCACCCT ACCTCACCAG
ACCGAGACCG GCGTGACGCC CGATCAGTAT TGCCAAGAGA AAGTCGCCCA GAGCGGCTCC
AGTTTCTACT ACAGCTTCCT GTTCCTGCCC GCCGAACGCC GCCGCGCGAT CACGGCGCTT
TATGCCTGGT GCCGCGAAGT CGACGATGTG GTCGACGACG CCCACGACCC CGCCCTGGCC
CACCAGCAAC TGGACTGGTG GCGCGGTGAG CTGCGTCACC TGTTTGAAGG TGAGCCGACC
CACCCCGTCA CGCAGGCACT GCGCCCGCAC GTGAAGGCCG CCGGACTGCC GCATGCCGAA
ATGTCGGAAG TACTCGACGG CATGGAGATG GACCTGACCC AGAGCCGGTA TCTCGACGAG
ATCGGCCTGA ACCGCTATTG CCACTGCGTG GCCGGCGTGG TCGGCACACT GAGCGCGCGG
CTGTTCGGCT ATTCGGATCC CCACACGCTG GTATTCGCCG AGAAGCTCGG GCTGTCGCTG
CAACTCGTCA ATATCCTGCG CGATGTCGGC GAGGACGCGC GCCGCGGCCG TATATATCTG
CCTGTCGATA CATTGCAGCG CTTCCAGGTG CCCGCGTCGG AAATCCTCCA GGGCAAGCAT
TCCGAGCGCT TTGTCGCGCT GATGCAGTAC CACGCTGGGC GCGCCCGCGC GCTGTACCGC
GAGGCGCTGG ACCTGCTGCC GCGCCAAGAT CGCCGCGCCC AGCGCGCAGG CCTGCTGATG
GGCGCCATCT ACCACGCGCT GCTCGACGAG ATCGAGCGCA GCGACTTCCA GGTGCTGAAC
CAGCGCATTG CGCTCACGCC GCTGCGCAAG CTCTGGATCG CCTGGAAGAC CTGGGTGCGC
AACAGCTAG
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| Protein sequence | MLQSRRRQAL TPPAPTLPHQ TETGVTPDQY CQEKVAQSGS SFYYSFLFLP AERRRAITAL
YAWCREVDDV VDDAHDPALA HQQLDWWRGE LRHLFEGEPT HPVTQALRPH VKAAGLPHAE
MSEVLDGMEM DLTQSRYLDE IGLNRYCHCV AGVVGTLSAR LFGYSDPHTL VFAEKLGLSL
QLVNILRDVG EDARRGRIYL PVDTLQRFQV PASEILQGKH SERFVALMQY HAGRARALYR
EALDLLPRQD RRAQRAGLLM GAIYHALLDE IERSDFQVLN QRIALTPLRK LWIAWKTWVR
NS
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