| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A1352 |
|---|
| Symbol | rimO |
|---|
| ID | 3608964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | + |
|---|
| Start bp | 1453630 |
|---|
| End bp | 1454988 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637690741 |
|---|
| Product | ribosomal protein S12 methylthiotransferase |
|---|
| Protein accession | YP_295566 |
|---|
| Protein GI | 73541046 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0621] 2-methylthioadenine synthetase |
|---|
| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAGA AAGACCAGAG CCCGCGCGTC GGCTTCGTTT CGCTTGGCTG CCCGAAGGCG
TTGGTCGACT CGGAACAGAT CATCACCCAG CTGCGCGCCG AGGGTTACGC AATCAGCGGC
ACCTATGACG GTGCCGACCT GGTTGTGGTC AACACCTGCG GCTTCATCGA CGAAGCCGTG
CAGGAGAGCC TCGACGCGAT CGGCGAGGCG CTGACCGAGA ATGGCAAGGT CATCGTGACC
GGCTGTCTCG GGGCGAAGAA GGATGCGGCG GGGCACGACA TCGTGTCGTC GGTGCACCCG
AAAGTGCTGG CCGTGACCGG CCCGCACGCC CTTGGCGAAG TCATGCAGGC GGTGCACACG
CACCTGCCCA AGCCGCATGA CCCCTTTACC GACCTGGTGC CGGCGGCCGG CATCAAGCTG
ACGCCCAAGC ACTACGCCTA CCTGAAGATT TCCGAAGGCT GCAACCATCG CTGCTCGTTC
TGCATCATCC CGTCGATGCG CGGCGACCTG GTGTCGCGTC CCGTCGCCGA AGTCATGCTG
GAAGCCGAGA ACCTGTTCAA GGCCGGCGTG AAGGAATTGC TGGTGATCTC GCAGGACACC
AGCGCTTACG GCGTGGACGT GAAGTACCGC ACCGGCTTCT GGAACGGACG TCCGCTCAAG
ACCCGCATGA CCGAACTGGT CGCGGCGCTG GGTGAACTGG CGGCCCAGTA CGGTGCGTGG
GTGCGCCTGC ACTACGTGTA CCCGTACCCG CACGTCGACG AGATCATTCC GTTGATGAAC
GGCGGTCACG TGCTGCCGTA CCTGGACGTG CCGCTGCAAC ACGCGCACCC CGACGTGCTC
AAGCGCATGA AGCGTCCGGC CAATGCCGAG AAGACGCTGG ACCGCATCCG CGCCTGGCGC
GAGGTGTGCC CGGACCTGAC GATCCGCAGC ACTTTTATCG CCGGCTTCCC GGGCGAAACT
GAAGCGGAAT TCGAGACCCT GCTCGATTTC ATCGCCGAAG CCGAGCTGGA CCGCGTGGGC
TGCTTTGCGT ACTCCCCGGT GGAAGGCGCG ACGGCCAACG ACCTGCCGGG CGCCTTGCCC
GACGAAGTCC GCGAGGAACG CCGCGCGCGC TTCATGGAGG TGGCCGAGGA AGTCTCCGCA
CGCCGCCTGC AGCGCAAGGT TGGCCAGACG CTGCGCGTGC TGATCGACGA GGTGAACCAG
GACGGCGGCA TCGGCCGGTC TTCGGCGGAT GCGCCGGAAA TCGACGGCCT GGTCTATATC
GCGCCGCCGG CCAAGCCGTC GCAGCGCTAT CGCGCCGGGG ACTTCGTTCA GGTGAAGATC
ACTGGCGCTG ATGGTCACGA CTTGTGGGGC GAGATTTGA
|
|---|
| Protein sequence | MTQKDQSPRV GFVSLGCPKA LVDSEQIITQ LRAEGYAISG TYDGADLVVV NTCGFIDEAV
QESLDAIGEA LTENGKVIVT GCLGAKKDAA GHDIVSSVHP KVLAVTGPHA LGEVMQAVHT
HLPKPHDPFT DLVPAAGIKL TPKHYAYLKI SEGCNHRCSF CIIPSMRGDL VSRPVAEVML
EAENLFKAGV KELLVISQDT SAYGVDVKYR TGFWNGRPLK TRMTELVAAL GELAAQYGAW
VRLHYVYPYP HVDEIIPLMN GGHVLPYLDV PLQHAHPDVL KRMKRPANAE KTLDRIRAWR
EVCPDLTIRS TFIAGFPGET EAEFETLLDF IAEAELDRVG CFAYSPVEGA TANDLPGALP
DEVREERRAR FMEVAEEVSA RRLQRKVGQT LRVLIDEVNQ DGGIGRSSAD APEIDGLVYI
APPAKPSQRY RAGDFVQVKI TGADGHDLWG EI
|
|---|
| |