| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A1293 |
|---|
| Symbol | |
|---|
| ID | 3611927 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | + |
|---|
| Start bp | 1381203 |
|---|
| End bp | 1382165 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637690680 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_295507 |
|---|
| Protein GI | 73540987 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00171024 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACTCAA GGCTACAATG CCGACCGTTC CCAACGGCCG TTCCGACAAC GTTCATGCAT
GCCCGGATCC TGCGCTATCT GGATGAGGTG GTACGCCGCG GCTCCATCCG CAAGGCCGCC
GAGTCTCTGC ATGTGGCGCC CACGGCGATC AACCGGCAGA TCCTCGATCT GGAAGCCGAG
CTTGGTGCGC CGGTCTTCGA CCGCATCAAC AAACGTCTGC GCCTGACACC GCTTGGTGAG
ATGGTGCTCG CGCACGTCCG GCAGACACTG CGTGAGCATG AGGCGCTGCG TGAGCGGATC
GAAGAGTTCA AAGGTGCCCG GAGGGGCGAG GTGACGGTAG CGGTGACGGC CGGGCTGGCC
GGATCGTTGA TGCCGTCGCT GACCCACGAA TTTCACCAGC GGTATCCGGG CATTGTTGTG
CGGGTGGTCG ACCTGCCGAT TGCCGATATC GTCCTGGCTG TCGAGCAGGG CGACGCTGAC
CTCGGCCTCG GCTATGACCT GCCTGCCGCG CCGGCGCTGC GGATCCTGGG GACGAGCGAC
TGGCAGATCG GTGCTGTGGT ACCTCCCGGT CATGAGTTGG CGGCACAACC GTCGGTCTTG
CTAAGTGAAT GCGTCGGCTA TCCGCTCGTG CTGCCGGCGC CATCGCTATC CATCCGCGCG
ATTCTCGACG ATGCCTTTGC GCGTCATGCA ATTGACGTGA CGCCTGCTGC CGAGTCGACC
TCGATGGCGC TGATCCAGCG CCTGGTCATG CTGGGTAGCG GCATTGCGCT GCTCAATCCA
CTCGACATCA TGGATGAGCG CGAGCGCGGT GCTCTCGTCC TGGTGCCGCT GCGCGACCGC
TACCTGCGGC GCCAGACGCT GGCGCTCGTC GCACGCGCGC AGACCGTGCT GAGTCCGGCG
GCCGAGTTGA TGGCGGCAGA TATCGGCGAG CGGTTGGCCG CGCTGTTCGC GCAAGGGCAT
TGA
|
|---|
| Protein sequence | MHSRLQCRPF PTAVPTTFMH ARILRYLDEV VRRGSIRKAA ESLHVAPTAI NRQILDLEAE
LGAPVFDRIN KRLRLTPLGE MVLAHVRQTL REHEALRERI EEFKGARRGE VTVAVTAGLA
GSLMPSLTHE FHQRYPGIVV RVVDLPIADI VLAVEQGDAD LGLGYDLPAA PALRILGTSD
WQIGAVVPPG HELAAQPSVL LSECVGYPLV LPAPSLSIRA ILDDAFARHA IDVTPAAEST
SMALIQRLVM LGSGIALLNP LDIMDERERG ALVLVPLRDR YLRRQTLALV ARAQTVLSPA
AELMAADIGE RLAALFAQGH
|
|---|
| |