| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A0929 |
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| Symbol | |
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| ID | 3610229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia eutropha JMP134 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007347 |
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| Strand | + |
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| Start bp | 1014770 |
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| End bp | 1017892 |
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| Gene Length | 3123 bp |
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| Protein Length | 1040 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637690320 |
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| Product | bacteriocin-processing peptidase |
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| Protein accession | YP_295152 |
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| Protein GI | 73540632 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR01193] ABC-type bacteriocin transporter
[TIGR01846] type I secretion system ABC transporter, HlyB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.247839 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATCGA AGCCCGCTAG CGAAGGCGCA GCGGCGGCCG AGGTGCCGTC GCCCGCGGCC
GCGCCTGCAT CCCCTGCTGC GGGTGCATCG CTCGCCGATT TCCTGTCGAC GGTCGAGATC
CTGTCGGCAC TCACGCGTGA GGAGCTGGAG CAGCTCGCCG CCGCGGCGCA GACGCAAACG
TTCGGCTTCG GCGACACCGT ATGCAATGCC GGCGAGCCCG CACCCGGCCT GTACATCATC
AAGGCGGGCT CCGTGCGCGT GTTCAACGAG GAGCACGGCA AGGAAATCAG CATGGGCGTG
CGCAAGACCG GCGAGGTCTT CGCGGATGTC GGGCTGCTGC GCGACTATCA CCATGAATCG
TCGGTGCGCG CATCGGGCAA GACCGAGCTG CTGATGATTC CGCGCAGCGT GGGCGAGAAG
GTCGTGGCGC GCAACCAGGC GGCGCTGGCG TTCATCACGA GCTATGTGGC GATCAGTTCG
GCCGGCGGCT TCGTGGCCCG CCTGTTCGAC CTGCGCGGCA AGCTGGACCG GCGCGAGCTG
GAAGACGCGG TGCGCAGCGT GGGCGTCAAG CGCGTGGCCG CAGGCAAGGA GATCCTGAAG
CAGGACGGGC GCGACGACCG CCGGCTCTAC GTTGTGCGCC AGGGCGCCGT GCGCATCGTG
CGCAACGAGG ACGATGACGA GTTTCCGCTG GCCACGCTCG GGCAGGGCGA TATCTTCGGC
GAGCGCGCGT GCGTGATGCG GCAGGAGCAG ATCGCCTCGG CCATCGCCGA GACCGATGTC
CGTCTGCTGG TGATCCCCGA AAAGACCGTG CAGCTCATCC TGGAACGCAA TCCGCGCCTG
CGCGAAGTGC TCGAAGAGCG CATCCGCGTG GTCGATCGCG AGCTGCATCG GCAGAAGAAG
CTCGCCGAGC GCCGCAAGCG TCCGGTGCTG CTCGACCTGC AATCCAAGCC GGAGCTTGGC
GAGCGGCTGA TCCGCCGGTT TGCGCTTGTC GAGCAGGCCG AGGAGATGGA TTGTGGTGCC
GCCTGCCTGG CCATGATCTG CCGGCACTAC GGGATTCCGA TGTCGCTTGG CAAGCTGCGC
GAACTTGCCA ACGTGACCAC GCAGGGCGCC ACGCTGGAAA GCCTCGCGCG CGCCGGCGAA
TCGCTCGGCT TCACCACGCG CGGCGTGCAG TGTACGCGCG AGTCGCTGAT GGGCTTCGAG
CTGCCGTTCA TCGTGCACTG GGAGGGCTAC CACTATGTGA TCGTGTACGG CGTCTCGGCG
CGCTGGGTAT GGGTGGCGGA CCCGGGTATC GGCTTCCGCA AGATGAGCGC CGAAGAGTTC
GAACGCGGCT GGAGCGGCAC CTGCCTGCTG TTCAGCCCCG GCGAAAGCAT GGCGCAGCTG
TCGGTGCAGC GCTCGCCGTG GCTGCGCTTT ATCAGCTATC TGGCGCCGTA CAAAAAGATC
CTCGCGCACC TGTTCCTGGC CACCTTCGTG ATCCAGGTGC TCGGCGTGGT GCCGCCTCTC
ATCATCCAGA ACATCCTCGA TGGCGTGGTG GTGCACCAGA ATATCGGGCT GCTGCACCTG
TTGATCGTCG GGCTCATCAT CGCGAACTTG TTTTCGCAAC TGATGTCGAC GATCCGCGCG
TACCTGGCCA ACTTCATGGT GCGCAACATG GATTTCGCCA TGATGTCGCA CTTCTTCAAG
CACACGCTGT CGCTGCCGCT GTCGTTCTTC GCCAAGCGCA AGACCGGCGA CATCTTCGCG
CGCTTCCAGG AGAACCAGAC CATCCGCGCA TTCCTGACCG AATCCACGGT GACGACGGCG
CTGAACCTGC TGATGGTGTT CATCTACTTC ACCATCATGT TTCTCTACAA CGTCAAGCTC
ACGCTGCTGC TGATCGCGTT CGTGATCCCG ATCGCGGCGC TGACCGTGGT GGTGACGCCC
AAGGTCAAGA CCTACGCGCG CGAGGTGTTC GCTGCGTCGA CGGACGCCAA GGCTTATCTC
ATGGAGACGC TTGGCGGCGC GGAGACCGTG AAGGGCATGG GCATCGAGCG GCCTGTCCGC
CTGCGCTGGG AAGCCAAGTA TGCGAAGGCG CTGGAAAAGC AGTACCAGGC GCAGGCCTTC
CACATCCTCG TCGGCATGAT CAGCCAGTTG CTCAATGCGG CGACCACCAT CGCCGTGCTG
TGGGTGGGCG CCACGCTGGT GCTGCAGCGC GAGCTGACGA TCGGCCAGCT GATCGCCTTC
AATGCGTTCA TGGGCAGTGT GCTCGCGCCG TTGATGGGGC TGGTCGCGTT GTGGGGCCAG
CTCAATGATG CCGGCGTGGC GATGGAGCGG CTTGGCGACG TGCTGGACCT CGAGCCCGAA
CAGAAGCCGC AGGACGTGAT GTCGCGCGTG CTGCTGCCCG ACCTGCAAGG CGAGATCGAG
ATGAACGGGC TGTACTTCCG CTATGGCGGC GAGGACACCG CCTATGTGCT CGAGAACATC
AGCCTGCATA TCAAGCCGGG CGAGATGGTG GCTATCGTCG GGCGCAGCGG CTCGGGCAAG
ACCACGCTCG CCAAGCTGCT GGTCGGCTTC TACCGGCCTA CCGAAGGCTC GATGAAGGTG
GACGGCTATG AAATCGGCAT GATCGACACC GAGTTCTACC GTGCCCAGGT CGGCTACGTG
ATGCAGACCA ACCTGCTGTT CTCCGGCACC ATCGCGGAGA ACATCGCCTG CGGCGACGAA
AGCCCCGACC GCCGCCGCAT CGAGGAAGTG GCCAGGATGG CGGACGCGCA CCCGTTCATC
ACCAAGCTGC CGCTCGGCTA TGAACAGATC GTGGGCGAGC GCGGCATGGG CCTGTCGGGC
GGGCAGATCC AGCGGCTGTG CATTGCGCGC GCGCTGTATC ACGACCCGCG CCTGCTGGTG
TTTGACGAGG CGACGTCGGC GCTCGATACG CAGTCCGAGA GTAATATCCT CGCGAACATG
CAGGAGATCC TGCGCGGGCG CACGGCGGTA ATCATCGCGC ACCGCCTCAG CACCATCATG
CAGGCCGACA AGATCCTGGT GCTGTACGAA GGCGCCGTCG TCGAGCAGGG CCGTCACGAT
GAACTGCTCG ACCGCAAGGG CATGTACTAC CAGCTGGTGC AAAAGCAACT GAGCTCAGCA
TGA
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| Protein sequence | MSSKPASEGA AAAEVPSPAA APASPAAGAS LADFLSTVEI LSALTREELE QLAAAAQTQT
FGFGDTVCNA GEPAPGLYII KAGSVRVFNE EHGKEISMGV RKTGEVFADV GLLRDYHHES
SVRASGKTEL LMIPRSVGEK VVARNQAALA FITSYVAISS AGGFVARLFD LRGKLDRREL
EDAVRSVGVK RVAAGKEILK QDGRDDRRLY VVRQGAVRIV RNEDDDEFPL ATLGQGDIFG
ERACVMRQEQ IASAIAETDV RLLVIPEKTV QLILERNPRL REVLEERIRV VDRELHRQKK
LAERRKRPVL LDLQSKPELG ERLIRRFALV EQAEEMDCGA ACLAMICRHY GIPMSLGKLR
ELANVTTQGA TLESLARAGE SLGFTTRGVQ CTRESLMGFE LPFIVHWEGY HYVIVYGVSA
RWVWVADPGI GFRKMSAEEF ERGWSGTCLL FSPGESMAQL SVQRSPWLRF ISYLAPYKKI
LAHLFLATFV IQVLGVVPPL IIQNILDGVV VHQNIGLLHL LIVGLIIANL FSQLMSTIRA
YLANFMVRNM DFAMMSHFFK HTLSLPLSFF AKRKTGDIFA RFQENQTIRA FLTESTVTTA
LNLLMVFIYF TIMFLYNVKL TLLLIAFVIP IAALTVVVTP KVKTYAREVF AASTDAKAYL
METLGGAETV KGMGIERPVR LRWEAKYAKA LEKQYQAQAF HILVGMISQL LNAATTIAVL
WVGATLVLQR ELTIGQLIAF NAFMGSVLAP LMGLVALWGQ LNDAGVAMER LGDVLDLEPE
QKPQDVMSRV LLPDLQGEIE MNGLYFRYGG EDTAYVLENI SLHIKPGEMV AIVGRSGSGK
TTLAKLLVGF YRPTEGSMKV DGYEIGMIDT EFYRAQVGYV MQTNLLFSGT IAENIACGDE
SPDRRRIEEV ARMADAHPFI TKLPLGYEQI VGERGMGLSG GQIQRLCIAR ALYHDPRLLV
FDEATSALDT QSESNILANM QEILRGRTAV IIAHRLSTIM QADKILVLYE GAVVEQGRHD
ELLDRKGMYY QLVQKQLSSA
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