| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A0415 |
|---|
| Symbol | |
|---|
| ID | 3609522 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | + |
|---|
| Start bp | 454469 |
|---|
| End bp | 456343 |
|---|
| Gene Length | 1875 bp |
|---|
| Protein Length | 624 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637689805 |
|---|
| Product | glycoside hydrolase 15-like protein |
|---|
| Protein accession | YP_294641 |
|---|
| Protein GI | 73540121 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACATCCG CAAGCAACCC AAGCAGCCCA TCGGAACTGG GCCAGCAGCC GTCCGAAGGC
GTGCACAAGA CGGTCGACGG CGGCGCGATT CATGCCACGC CATCGCTGTC TCTCGGCATG
ATTGGCAATT GCGCGTTCTC GGCGCTGGTC GACAGCCGCG GCCGCATCGT GTGGTCGTGC
ATGCCGCGCT TCGACGGCGA TCCGGTCTTC AACGCGCTGC TCGACCCGAG CGAAAACGCT
GGCCATTTCT CGATCGAGAT TGAAGACTTC CAGTCTTCGA GCCAGTGGTA CGAGCCCAAT
ACCGCCGTGC TGCGCACGCG CGTGACGGAC ATCCATGGCA ATTGCCTCGA GATCACCGAC
TTCGCGCCGC GCTTCTTCCG GCTCGGCCGC TATTTCCGTC CGATAACACT CGTGCGCCGC
ATCCGTCCGG TGCGCGGCGC GCCGCGCGTG CGCGTGGTGG TCGCGCCGCG CTTCGACTGG
GGACGCAAGG TGCCCGAAGT CACGCGCGGC AGCAGCCATG TGCGCTTCAT CGGCGACAAT
ATGACGCTGC GCATGACCAC CGATGCGCCG CTTGCGTACG TGCTGTCGCA TACACCGTTC
CTGGTCACGC GCAGCCACAA CTTCATCCTG GGGCCCGACG AGACGCTCAA TCACGGCGTC
GAAGAAACCG CGCGCGACCT CGAGCAGGAG ACCACGTCCT ACTGGCGGCT GTGGAGCCGC
CGGCTGGCAG TGCCGCGCGA ATGGCAGGAC GCGGTGATTC GCGCGGCCAT CACGCTCAAG
ATGTCGCTGT ACGAGGAAAC CGGTGCGATC GTCGCCGCCA TGACCACGAG CATCCCCGAA
GCGCCCGGCA GCGGACGCAA CTGGGACTAC CGCTTCTGCT GGCTGCGTGA TGCGTTCTTT
GTGGTGCGCG CGCTCAATAG CCTGTCCGAG GTCGGCACGA TGGAAGACTA TCTGCGCTGG
CTGTCCAATG TGGTCATGCA ATCGCAGGAC GGACATATCC AGCCGCTGTA CGGCATCGGG
CTCGAGCGCG AACTGCCAGA AAGCATCTTC GACCATCTGC CCGGTTATCG CGGCATGGGT
CCGGTGCGCG TCGGCAACCA GGCGCAGGAG CACTTCCAGC ACGACGTCTA CGGCAATATC
GTGCTGGGCG CCGCACAGGC GTTCCATGAC CACCGGCTGC TGCATCGCGG CGGCCCGGCC
GAATTCCGCC GGCTGGAAGA GGTGGGCGAG CAGGCCGTGA AAGTGTTCGG CACCCCCGAC
GCGGGCATGT GGGAGCTGCG TACGCGTGCC CGCGTGCATA CGTCGTCGGC GCTGATGAGC
TGGGCCGCTT GCGACCGCCT CGCGAAGGTT GCCGAGAAGC TCGCGCTGCA GTCGCGTGCC
GAGTACTGGC AGGACCATGC GCAGCGCATG AAGGAACGCA TCCTGGCCGA ATCCTGGAAC
GAGTCGCGCC AGGCGTTCGC CGAAAGCTTC GGCGGCCGCG AACTCGATGC GAGCGTACTG
CTGATGGCCG AGGTGAACTT TATCGAACCG CGCGACCCGC GCTTCATCTC CACGATCAAA
GCGCTCGAAG ACACGCTTTG CGACGGCCCC TACATGCGCC GCTACGAGGC CCCCGACGAC
TTCGGCAAGC CCGAGACCGC GTTCAACATC TGCACCTTCT GGCGCATCGA CGCACTAGCA
CGCGTTGGCC GGCGCGATGA AGCGCGCGAG ATCTTCGAGT CCATGCTCGC CGCGCGCAAC
CCGCTGGGCC TGTTGTCCGA AGACACCCAC CCTGTTACGG GCGAGATGTG GGGCAATTTC
CCGCAGACCT ATTCGATGGT CGGGCTGATC AACGGCGCCA CGCGCCTGTC GGCGCCGTGG
GACAGCGTGA TCTGA
|
|---|
| Protein sequence | MTSASNPSSP SELGQQPSEG VHKTVDGGAI HATPSLSLGM IGNCAFSALV DSRGRIVWSC
MPRFDGDPVF NALLDPSENA GHFSIEIEDF QSSSQWYEPN TAVLRTRVTD IHGNCLEITD
FAPRFFRLGR YFRPITLVRR IRPVRGAPRV RVVVAPRFDW GRKVPEVTRG SSHVRFIGDN
MTLRMTTDAP LAYVLSHTPF LVTRSHNFIL GPDETLNHGV EETARDLEQE TTSYWRLWSR
RLAVPREWQD AVIRAAITLK MSLYEETGAI VAAMTTSIPE APGSGRNWDY RFCWLRDAFF
VVRALNSLSE VGTMEDYLRW LSNVVMQSQD GHIQPLYGIG LERELPESIF DHLPGYRGMG
PVRVGNQAQE HFQHDVYGNI VLGAAQAFHD HRLLHRGGPA EFRRLEEVGE QAVKVFGTPD
AGMWELRTRA RVHTSSALMS WAACDRLAKV AEKLALQSRA EYWQDHAQRM KERILAESWN
ESRQAFAESF GGRELDASVL LMAEVNFIEP RDPRFISTIK ALEDTLCDGP YMRRYEAPDD
FGKPETAFNI CTFWRIDALA RVGRRDEARE IFESMLAARN PLGLLSEDTH PVTGEMWGNF
PQTYSMVGLI NGATRLSAPW DSVI
|
|---|
| |