Gene Reut_A0280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_A0280 
Symbol 
ID3610019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007347 
Strand
Start bp312438 
End bp313637 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content64% 
IMG OID637689669 
Productpenicillin-binding protein 6 
Protein accessionYP_294506 
Protein GI73539986 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1686] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.892374 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAACA GAGCCACGCC GCGCCTAGCG TCCGTCTTTG CCCCCGCCGC CATCGTCGCG 
GCAGCCACGC TCGCCGCCGC GCCCGCCGCC GTGCTGGCCC AGGGTGTGCC GATGCCGCAG
GTGGCCGCCA AGTCCTGGAT GCTGTTCGAC GTGACCAGCG GCCAGGCACT GGCTTCGCAG
AACGCGGACC AGCGCATCGA GCCCGCGTCG CTGACCAAGC TGATGACCGC CTACCTGGCG
TTCGAGGCAC TGAAGGAAAA GCGTCTGACG CTGGACCAGG CCGTGGTCCC GACCACGCTG
GTGCTGAAGG TCAAAAGCGA TGAATCGCGC ATGTTCATCG AGCCCAACAA GCCGGTCAGC
GTGCAGGACC TGCTGATGGG CCTGATCGTG CAGTCGGGCA ACGACGCCGC ACTGGCGCTG
GCCGAAGCCG TGGGCGGCTC GGAAGAGGGT TTCGTCGCGA TGATGAACCG CGAAGCCCAG
CGCATGGGCA TGAAGAACAC GCACTTCACC AACACCGACG GCATTCCCGA CCCGAACCAC
TACACCACCG CGGTGGATCT TGCGACGCTG ACCACGCGAC TGATCCAGGA CTTCCCCGAG
TACTACGGCA TGTACTCGCA GAAGGAGTTC ACCTATAACA AAATCAAGCA GCCGAACCGC
AACCGCCTGC TGTATATCGA CCCGACCGTC GATGGCGTCA AGACCGGCCA CACCAAGTCG
GCCGGCTACT GCCTGATCTC GTCGGCCAAG CGGCCGCTGG CCAATGTGCC GAACGGATCG
CGCCGGCTGA TTTCGGTCGT GATCGGCACC ACCACCGAAC AGGTGCGCAC CCAGGAAAGC
CTGAAGATCC TCAACTACGG CTTCCAGTTC TTCGACACGC TGCGCCTGTA TGACAAGGGC
CAGGTGCTGG CTACGCCGGA CATCTACAAG GGCAAGGCCG GCACGGTCAA GATCGGCGTG
CAGAACGAGA CCTTCGTCAC GGTGCCCAAG GGCACGGGCG GCCGCCTGAA GCCGGTGCTG
GAGCGTCAGG AACTGTTGAT CGCCCCGATC GCCGCCGGCC AGCAGGTGGG CTCGGTGAAG
CTGATGGATG GCAACACGAA GGTGGCAGAA TTCCCGGTGG TGGCACTGGA GGAAGTGCCC
GAAGCCGGCT TCTTCGGCCG CCTGTGGGAC ACCATCCGCC TGTGGTTCAA GCGCAAGTGA
 
Protein sequence
MLNRATPRLA SVFAPAAIVA AATLAAAPAA VLAQGVPMPQ VAAKSWMLFD VTSGQALASQ 
NADQRIEPAS LTKLMTAYLA FEALKEKRLT LDQAVVPTTL VLKVKSDESR MFIEPNKPVS
VQDLLMGLIV QSGNDAALAL AEAVGGSEEG FVAMMNREAQ RMGMKNTHFT NTDGIPDPNH
YTTAVDLATL TTRLIQDFPE YYGMYSQKEF TYNKIKQPNR NRLLYIDPTV DGVKTGHTKS
AGYCLISSAK RPLANVPNGS RRLISVVIGT TTEQVRTQES LKILNYGFQF FDTLRLYDKG
QVLATPDIYK GKAGTVKIGV QNETFVTVPK GTGGRLKPVL ERQELLIAPI AAGQQVGSVK
LMDGNTKVAE FPVVALEEVP EAGFFGRLWD TIRLWFKRK