| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A0260 |
|---|
| Symbol | |
|---|
| ID | 3610116 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | + |
|---|
| Start bp | 288733 |
|---|
| End bp | 290691 |
|---|
| Gene Length | 1959 bp |
|---|
| Protein Length | 652 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637689649 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_294486 |
|---|
| Protein GI | 73539966 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGAAT CGTCGGCGAC GACCTTCCCG CGATTGCTGC TGGAGCACGC CCGGCAGCGG
CCGGCGCATC CGGCATATCG CGAAAAGGAT CTCGGCATCT GGCAAACATA CAGCTGGTCA
CAGGCGGCGC AGGAGGTCAG GGCGCTTGCT TGCGGGCTTG CGGCATTGGG ATTCACGCGC
GGCATGAACC TGGCGGTGGT GGGCGACAAC CGCCCGCGCC TGTACTGGGC CATGACCGCC
GCACAGGCCC TGGGCGGCGT GCCGGTGCCC TTGTACCAGG ACGCCATTGC GAATGAAATG
GTCTACGTGC TCAACGACGC GGAGATCGAC TTCGCGATCG TCGAGGACCA GGAGCAGGTG
GACAAGCTGC TGGAAGTCGA AGAGCAGCTT GCCGCTTCCG GCCGCAGCGT GCGCCACGTG
ATCTACGAAG ATCCGCGCGG CCTGCGCGAC TACGATCATC CGTCGCTGAT GTCGTACGAG
CGCCTGCAGG AAATCGGGCG CGAGTTCGAC CAGGCGCATC CCGGCTTCTA TGACGCATCG
ATTGCCGCGG GATCGCCCGA GGACACGGCC ATTATCCTCT ATACATCGGG TACCACCGGC
AAGCCCAAGG GCGTTTGCCA CGCGCATCGG GGCCTGATCG GCTCGGCGCA GAACGGTTGC
GGCTTCGACG GCCTGACGGC GAAGGACGAC GTGCTGTCCT ACCTGCCGAT GGCGTGGGTT
GGCGACAACC TGTTCTCGTA TGCGCAGGCC ATGGTGGCCG GCTTCACGGT GAACTGCCCC
GAATCGCGCG AGACCGTGAT GACGGACTTG CGCGAGATCG GCCCAACCTA TTACTTCGCG
CCGCCGCGCA TCTATGAAGG GTTGCTCACG CAGGTGATGA TCCGCATGGA AGACGCAGGC
TGGATCAAGC GCAAGCTGTT CCATTGGGCC ATGGACGTCG CGCGCCGCTG CGGCGCCGAC
ATCCTCGACG GCAAGCACGT CGGACTGGCC GAACGCATGC GTTACGCCGC CGGCGAGTTC
CTCGTCTACG GGCCGCTGCG CAACGTGCTC GGCATGAGCC GCATCCGCGT GGGCTATACC
GCTGGCGAGG CGATCGGCCC GGACCTGTTC CGCTTCTATC GTTCGATCGG CGTGAACCTC
AAGCAGTTCT ATGGCCAGAC CGAAACCTGC GCCTATGTCT GCCTGCAGCC CGATGGTCAG
GTGAAGTTCG ATTCCGTGGG GCCCGCGGCA CCGGGCATGG AAATCCGCAT CGCCGACAAC
GGCGAAGTGC TCGTGCGTGG CGTAGGTCTG CTGAAGTCCT ACTACAAGCG CGACGATGCC
ACGCGCGAGG CCATCAACGA CGAGGGCTAC TTCATGACCG GCGATGCCGG CGTGATCGAT
GCCGACGGCC ATCTCAAGAT CATCGACCGC GCCAAGGACG TGGGCAAGCT TGCCGACGGC
TCGATGTTCG CGCCCAAGTA CATCGAGAAC AAGCTCAAGT TCTTTCCGTA CATCAAGGAA
GCGGTGGCTT TCGGCACGGG CCGCGACAAG GTGTGCGCGT TCATCAATAT CGATTTCGAC
GCGGTGGGCA ACTGGGCCGA GCGCCGTCAC CTGCCGTACG CCGGCTATGT GGATCTCGCG
GGCCAGCCTG ACGTGATCGC GATGATCGGC GAATGCGTCG AACAGGTGAA TGCCGACCTC
GTCAACGACG GCATGCTGGC CGGCTCGCAG ATCGCGCGCT TCCTGATTTT GCACAAGGAG
CTTGATCCGG ATGACGACGA ACTGACCCGC ACGCGCAAGG TGCGGCGCGG CTTTATCGCA
GAGAAGTACG CGGTGCTGGT CGATGCGCTG TATGCGGGCA AGACCGAGCA GTTCATCGAG
ACGCGCGTCA AGTTCGAGGA CGGGCGCGAG GGCAGCGTGT CGGCCACGCT GAGGCTGATG
GATGCCAAAC GCCTGCCGCC GGCGGCACGC GCGGCATGA
|
|---|
| Protein sequence | MQESSATTFP RLLLEHARQR PAHPAYREKD LGIWQTYSWS QAAQEVRALA CGLAALGFTR
GMNLAVVGDN RPRLYWAMTA AQALGGVPVP LYQDAIANEM VYVLNDAEID FAIVEDQEQV
DKLLEVEEQL AASGRSVRHV IYEDPRGLRD YDHPSLMSYE RLQEIGREFD QAHPGFYDAS
IAAGSPEDTA IILYTSGTTG KPKGVCHAHR GLIGSAQNGC GFDGLTAKDD VLSYLPMAWV
GDNLFSYAQA MVAGFTVNCP ESRETVMTDL REIGPTYYFA PPRIYEGLLT QVMIRMEDAG
WIKRKLFHWA MDVARRCGAD ILDGKHVGLA ERMRYAAGEF LVYGPLRNVL GMSRIRVGYT
AGEAIGPDLF RFYRSIGVNL KQFYGQTETC AYVCLQPDGQ VKFDSVGPAA PGMEIRIADN
GEVLVRGVGL LKSYYKRDDA TREAINDEGY FMTGDAGVID ADGHLKIIDR AKDVGKLADG
SMFAPKYIEN KLKFFPYIKE AVAFGTGRDK VCAFINIDFD AVGNWAERRH LPYAGYVDLA
GQPDVIAMIG ECVEQVNADL VNDGMLAGSQ IARFLILHKE LDPDDDELTR TRKVRRGFIA
EKYAVLVDAL YAGKTEQFIE TRVKFEDGRE GSVSATLRLM DAKRLPPAAR AA
|
|---|
| |