| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A0173 |
|---|
| Symbol | |
|---|
| ID | 3609813 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | - |
|---|
| Start bp | 199228 |
|---|
| End bp | 200583 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637689561 |
|---|
| Product | sensor histidine kinase |
|---|
| Protein accession | YP_294399 |
|---|
| Protein GI | 73539879 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00702706 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATGCCG CTCCTGCCGT GTCCCATCCG CCAGCTTTCA CCGCTTCGCC GCCGCTTCCG
GCCGGACCCG CCGCGCGTCC TAGCCTGGTG AGCCTGCGAC GCCTGTTCTG GCTGCGCTGG
GCGCTGCTGG CCGGGCAGGC ACTGTGCCTG CTGTCGTGCG AGCCGATCAT TGGTGTCACG
CTGCCGACGG GCCCGCTGCT GGTCGTCTTT GCGCTGCAGG CGCTGTTCAA CGTGCTGACC
GGCCTGCGCC TGCGGCTGCA CACGCGGCAC GGCTCGTTGC CGGGCGAAGC GGAGCTGATG
GGCCAGTTGC TGGTCGACCT GACCGCGCTA TCGGCGATCC TGTTCTATAC CGGCGGCGCC
ACCAACCCGT TCGTGTCGTT CTACCTGCCG GGGCTCGCCA TCGCAGCCGC GATCCTGCCG
TGGCGGCAGG TGATCGCGCT GGCGTGCTTC GCGCTGGCCT GCTACACGGT GCTGCTGTTC
GAGTACCTGC CGCTGGATCT GCACGATCCG GACAAGGCCG TGAACTATCA CCTCGCCGGC
ATGTGGCTCA ATTTCGTGGC CAGCGCAGTG ATGATCGCTC TGTTCGTGGC GCGGCTTTCC
GGCGTGCTGC GCCAGCGCGA GGCGCAACTG CACCTGGCGC GCGAACAGCT GTTGCGTGAA
GCGCGCGTGG AAGACCTCAA TGCCCAGGCG GCAGCCGTGG CCCACGAGAT CGGCACGCCG
CTGGCAACGC TGGCGGTCAT TGCCGGCGAA CTGCGCGCCG ATGCCTCGGA CCGCGCGCGC
AGCGGCACGC CAGTGGCCGA TTACCTCCCG GACCTGCTGA CCGTCGAGCA GCAACTGGAA
TTGTGCCGAA CCATCCTGGC GCGGCTACGC GAGGATCCTG CCACGCTCGA GCCCGAGCGC
ATCGACGCAT GGCTTGGCAG CTTTGCGGAG CGCTGGCAAC TGCGTCATCC CAATGCCACG
TTGCAGGCCA ACGCCACTGC ACAGGCTGGT GCACTGGCCA TCGAACCGGC ACGCGTGGGA
CAGATCCTGA CCATCCTGCT GGATAACGCC GCGCGCAGCC AGCAATCGGC CGGGCATGCG
CAACGGCCGC TGCAACTGGA AATCGCCTTC GAGCAGGGCA ATATCGCCTT CCGCGTGAGC
GACCACGGCG ACGGCATTCC GCCCGAACTG CGTTCGCAGC TTGGCGAGAC TCCCGTGGTC
AGCCCGCACG GCGGCCAGGG CATCGGCCTG TACCTCGCGC AGAGCGGCGC GCGGCAGATG
GGCGGCGGAC TCGCGTGGCG CGATCGCCCC GGCGGCGGCA CGATCGCCGA ATTGCGTGTG
CCGTCCTCCC CTTCGCTGGC AGTCAATCCG TCATGA
|
|---|
| Protein sequence | MHAAPAVSHP PAFTASPPLP AGPAARPSLV SLRRLFWLRW ALLAGQALCL LSCEPIIGVT
LPTGPLLVVF ALQALFNVLT GLRLRLHTRH GSLPGEAELM GQLLVDLTAL SAILFYTGGA
TNPFVSFYLP GLAIAAAILP WRQVIALACF ALACYTVLLF EYLPLDLHDP DKAVNYHLAG
MWLNFVASAV MIALFVARLS GVLRQREAQL HLAREQLLRE ARVEDLNAQA AAVAHEIGTP
LATLAVIAGE LRADASDRAR SGTPVADYLP DLLTVEQQLE LCRTILARLR EDPATLEPER
IDAWLGSFAE RWQLRHPNAT LQANATAQAG ALAIEPARVG QILTILLDNA ARSQQSAGHA
QRPLQLEIAF EQGNIAFRVS DHGDGIPPEL RSQLGETPVV SPHGGQGIGL YLAQSGARQM
GGGLAWRDRP GGGTIAELRV PSSPSLAVNP S
|
|---|
| |