Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Reut_D6525 |
Symbol | |
ID | 3607891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia eutropha JMP134 |
Kingdom | Bacteria |
Replicon accession | NC_007337 |
Strand | - |
Start bp | 81154 |
End bp | 83067 |
Gene Length | 1914 bp |
Protein Length | 637 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637689383 |
Product | conjugal transfer coupling protein TraG |
Protein accession | YP_293680 |
Protein GI | 72384327 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.646585 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATCA AGATGAACAA CGCGGTAGGG CCGCAAGTCC GAACCGCCAA ACCGAAGCCG AGCAAGCTGC TGCCGGTGCT GGGCGCGGCC TCGATGGTCG GCGGCCTCCA GGCCGCGACG CAGTTCTTCG CCCACACGTT CGCCTATCAC GCGACCCTCG GCCCCAACGT GGGCCACGTG TACGCGCCCT GGTCGATCCT GCACTGGACG TACAAGTGGT ACAGCCAGTA CCCGGACGAG ATCATGAAGG CCGGCAGCAT GGGGATGCTG GTTTCGACCG TGGGCCTGCT GGGCGTGGCC GTGGCGAAGG TCGTCACGTC CAACAGCTCG AAGGCGAACG AGTACCTGCA CGGCTCGGCC CGCTGGGCCG AGAAGAAGGA CATTCAGGCG GCCGGCCTGC TGCCACGCGA GCGCAACGTC CTGGAGATCG TCACCGGCAA GGCCGCACCC ACGGCTACCG GCGTGTACGT GGGCGGCTGG CAGGACAAGG ACGGCAATTT CTTCTACCTG CGGCACAGCG GCCCCGAGCA CGTGCTGACC TACGCGCCCA CGCGCTCGGG CAAGGGCGTC GGCCTGGTGG TGCCCACGCT GCTGTCGTGG GGCGCGAGCA GCGTCATCAC CGACTTGAAG GGCGAGTTGT GGGCCTTGAC CGCCGGCTGG CGGCAGAAGC ACGCCAAGAA CAAGGTGCTG CGCTTCGAGC CGGCCAGCAC CTCGGGCGGC GTCTGCTGGA ATCCGCTGGA CGAAATCCGC CTCGGCACCG AATACGAGGT GGGTGACGTG CAGAACCTTG CCACGCTGAT CGTTGACCCG GACGGCAAGG GCCTGGACTC GCACTGGCAG AAGACCGCCT TCGCGCTCCT GGTCGGCGTG ATCCTGCACG CGCTGTACAA GGCCAAGGAC GATGGCGGCA CCGCCACGCT GCCGTCCGTC GATGCGATGC TGGCCGACCC GAACCGGGAC ATTGGCGAGC TTTGGATGGA AATGGCGACC TACGGGCACG TAGACGGCCA GAACCATCAC GCCATCGGCT CGGCGGCCCG CGACATGATG GATCGGCCCG AGGAAGAAGC CGGATCGGTG CTGTCCACGG CCAAGTCGTA CCTGGCCCTG TACCGCGACC CCGTGGTGGC CCGCAACGTC AGCCGGTCGG ACTTCCGCAT CAAGCAGTTG ATGCACGAGG ACGACCCGGT AAGCCTCTAC ATTGTCACCC AGCCCAACGA TAAGGCCCGC CTGCGGCCGC TGGTGCGCGT CATGGTGAAC ATGATCGTGC GCCTGCTGGC CGACAAGATG GACTTCGAGG GCGGCCGGCC GGTGGCGCAC TACAAGCACC GGCTCTTGAT GATGCTGGAC GAGTTCCCGA GCCTCGGGAA GCTGGAGATC ATGCAAGAGT CGCTGGCCTT CGTGGCCGGC TACGGCATCA AGTGCTACCT CATCTGCCAG GACATTAACC AGCTCAAGAG CCGCGAGACG GGCTACGGCC ACGACGAAAG CATCACGTCG AACTGCCACG TGCAGAACGC CTACCCGCCC AACCGCGTCG AGACGGCCGA ACACCTGTCC CGCCTCACCG GGCAGACCAC CGTGGTGAAG GAGCAGATCA CGACCAGCGG CCGCCGCACG GCGGCGATGC TGGGCCAGGT GTCGCGCACT TACCAGGAAG TGCAGCGGCC CTTGCTGACG CCCGACGAAT GCCTGCGCAT GCCGGGGCCA AAGAAGAACG CCCAGGGCGA GATCGAAGAA GCCGGCGACA TGGTGATCTA CGTCGCGGGC TACCCGGCGA TCTACGGCAA GCAACCCCTG TACTTCAAAG ACCCAGTGTT CTCGGCACGC GCCGCGATCC CTGCGCCCAA GGTCAGCGAC CGCCTGCGCG CCGTCGCACA GGCCGAGACG GAAGGGGAGG GCATCACGAT ATGA
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Protein sequence | MKIKMNNAVG PQVRTAKPKP SKLLPVLGAA SMVGGLQAAT QFFAHTFAYH ATLGPNVGHV YAPWSILHWT YKWYSQYPDE IMKAGSMGML VSTVGLLGVA VAKVVTSNSS KANEYLHGSA RWAEKKDIQA AGLLPRERNV LEIVTGKAAP TATGVYVGGW QDKDGNFFYL RHSGPEHVLT YAPTRSGKGV GLVVPTLLSW GASSVITDLK GELWALTAGW RQKHAKNKVL RFEPASTSGG VCWNPLDEIR LGTEYEVGDV QNLATLIVDP DGKGLDSHWQ KTAFALLVGV ILHALYKAKD DGGTATLPSV DAMLADPNRD IGELWMEMAT YGHVDGQNHH AIGSAARDMM DRPEEEAGSV LSTAKSYLAL YRDPVVARNV SRSDFRIKQL MHEDDPVSLY IVTQPNDKAR LRPLVRVMVN MIVRLLADKM DFEGGRPVAH YKHRLLMMLD EFPSLGKLEI MQESLAFVAG YGIKCYLICQ DINQLKSRET GYGHDESITS NCHVQNAYPP NRVETAEHLS RLTGQTTVVK EQITTSGRRT AAMLGQVSRT YQEVQRPLLT PDECLRMPGP KKNAQGEIEE AGDMVIYVAG YPAIYGKQPL YFKDPVFSAR AAIPAPKVSD RLRAVAQAET EGEGITI
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