| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_D6521 |
|---|
| Symbol | |
|---|
| ID | 3607887 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007337 |
|---|
| Strand | - |
|---|
| Start bp | 73785 |
|---|
| End bp | 78131 |
|---|
| Gene Length | 4347 bp |
|---|
| Protein Length | 1448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637689379 |
|---|
| Product | TOPRIM |
|---|
| Protein accession | YP_293676 |
|---|
| Protein GI | 72384323 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4227] Antirestriction protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGATCA CGAAAGCCGA GGCGCAAGGG GTGACGCGGG CTTTCGTCCG CGACTACCCC
GGCGCGCTGG AGCTGGCCTA CAAGTTCCGC GAGGACGCGG CCGAGCTGTA CGGGCCGCGA
GCGGCCGAGG TGCCGGCCGA CATGAAGGGC GGCTACGTGC CCAAGGAGAC GCTGCACGCC
GGCCGCGCCT ACCGTGGCCG CGTGGACGTG CCCTTGCAGA ACGTCGAGAG CGCCGGCGAC
CTACTGATGA CGCTGCGGCA CGAGGTGCTA GGCCACTACG GGGCCAACAC CTTCGCGCCG
GGCGAGAAGC GCGCCTTGCT GGACGGCCTG GCGGCCGCCC GCAACGAACC CACCCTCAAG
CCGCTATGGG ATGACGTGAA CCGGCGCTAT GCCGGCCAGT CCCTGGACGT GCGCGCCGAG
GAAGTGTTTG CCCTGCACTG CGAGGGCATC GAGCCGAGCC AGCACCAGGT CGCCGACCAG
GTGCAGCAGC GCGGCCAACA GTCATTCACG GAAACCTGCA TCGCCCGCGT GCGGCCCATG
CAGGCCGACG ACCTGCACAA CATCGTGTGC ATGGTCGCCC AGGGCCTGCG CGACCGTTCC
CGGACACAGC AGAACTTCCC TCAGTTCAAC GAGCTATTCC GAAGGGACGA GAACATGGAG
CCGAAGAAGC CGTTTCACGA AGTCGTGGCC GAAAAGCTGA TCGAGCAGCT CAAGGCCGGC
ACCGCACCGT GGCAAAAGCC GTGGGAGCCG GGCGAACCCA ACGCCTACCT GCCGATGAAC
CCGACCACCG GCAAGCGGTA CAAAGGGATC AACGCCATCC ACCTGATGGC CCAGGGCCGC
AGCGATGCGC GCTGGATGAC CTACAAGCAG GCCGCCGCCG TGGGCGCGCA GGTTCGCAAG
GGCGAGAAAG GCACGCCGGT TCAATACTGG AAGTTCAGCG AAGAGCAAGA CAAGCTGGAC
GACAGCGGCC GGCCCGTCCT CGATGCGAAG GGCCAGCCGG TCAAGGAAAC CGTCATGCTG
GAGCGGCCGC GCGTGTTCTT TGCGACCGTG TTCAACGGCG AGCAGATCGA CGGCCTGCCG
CCGCTCCAGC CGAAGAAGGA ACAGACTTGG AACGCCGTCG AGCGCGCCGA GCACATCCTG
AAAGCCTCGG GCGCGACGAT CACCCACGCC GCCGGTGATC GGGCGTTCTA CCGCCCTTCG
ACCGACAGCA TCACCCTGCC GGAGCGCGGC CAGTTCCCCA GCTCCGACCG CTACTACGCG
ACCGCGCTGC ACGAGCTGGG CCACTGGACG GGCCACGCTT CGCGCCTTGA CCGCGACCTG
GCGCACCCGT TCGGGAGCGA GGGGTACGCC AAGGAAGAGC TGCGCGCCGA AATCGCTTCC
ATGATCGTCG GCGACGAGCT GGGCATCGGC CACGATCCGG GCCAGCACGC CGCCTATGTG
GGTTCGTGGA TCAAGGCGCT GCAAGACGAG CCGCTGGAGG TGTTCCGCGC GGCCGCCGAT
GCCGAGAAGA TTCACGACTA CGTGCTGGCC TTCGAGCAGA AGCAGGTTCA GGAGCAAGAC
CAGCAGCAGA GCCAGGCCCA GGACGAAGCC GTGGCCCAGG CCCTGGCCGT GGACATTGCC
GAAGTCCTGG ACAACCCGGA CGTGTCTTTC AGCCACTACC AGGCATTCCA GGGCGACACC
CTGGAAGACG CCTTGCGCAG CCGTGGCCTC GAAACCGTGG GCAGCATCAC CGGCACCGAT
CCCGAGCAGT TCTACGCGGT CGCGCATGAC CGGCTGTCGC CGGTGTTCGG CATCGACCCG
AGCCACACCG ACACCGACAA CGCCTACCTG GAGCGCAAGG GCTTGGCGCA AGAGTTCGCC
AACATGGCCG AACAGCTCCA CCTCGCGCAG CAGCTCCAGC AGCACGGCGA ACAGATCGTG
TCGAGCATCG ACGCCGAAGC CAGGTGGAGC GACGGCCAGC GCATCTTTGC GTTCCACGAC
CAGGACGGTG AACCCCACCA GGTTCGCAGC CTGGACGAGC TGAACAACTA CGCGCCCGAC
CAGTTGATGG CCCTGCCGGC GCTGACCCAG CAGCAAGCGG CCGTCGCAGA CCAGGAGGCG
AACATGACCC CACCGACCAA CGACCAGGCG GCCGCCCTGC TGGCCGCCCA TCCTGCCGAC
GCGGTGCAGG GCATCGAGCA GGCCGCCGCC GCGCGCCGGC AGCTCGCCGC CGGCGAGATC
GACGGCCAGG CGTTCGCCGA CGCGACCCGT CAACACCTTG GCGTTGAGCT GCCGCCCGAC
TGGAGCGGAG AGCTGCGCAT CGTCGGCGTG GCCGAGCAGG ACGGCCAGAC CGTCGATGCC
GCCCAGGCCG GCATCGAGCC GCAGGCGTTC CAGGTCTACG CGCGCAAGGC CGATGCGCAG
TTCGGCGAGG ACGCCTTTGC CTTCGTCGCC GGCACCCGCA CCGAGGGCCA GGCCGAGGCT
CTGACCGAGC GCCTGCACCT GGTCGATGCG CTGGGCACCG ACAACCAGCA CGAGCGCGCC
GCCAAGCTGG CCCGCGTGCA GGAAGAGCGT GTACGGCGCG ACCCCAACGC GACCGAAGAG
GACATTTCAG CCGCTAAAGA GGCACGCAAG ACCGCCGAGG CGTCGGCCAT GCTCAACGAC
AGCGACGCGC AGCGCCGCGC GGCCGAGCTG GAGCGCCAGG AACGCGAGCG GCAGCAGGCG
CAGCCGCAGG CCGAGAAGCC CGAACGGCAG TACATCAACG TGCCGTACAA GGAGAAGGAC
GAGGCCAAGA GCCTCGGGGC GCGTTGGGAT CGGCAGCAAC AGTCCTGGTA CGTGCCGCCG
GGCACCGATG CCGCTCCCTT CGCCAAATGG GCGCAGGGAG CCGCTACAGC GGCCGTAGAG
CCGCGTTCGG CCCAGCCGGC ACCCGAAGCC CAGGGCGAGG CGCAGAAGCC CGCGCAGCAG
GCCCAGCAGG CCCGCCAGTA CCTGGCCGTG CCCTACGAGC AGCGCAACGC GGCCAAGGCC
GCCGGCGCGC TTTGGGACAA GGCCGCGAAG TCCTGGTATG TCGGCCCGCG CGCCGACGCG
GCGAAGCTCG AACGCTGGAA GCCCGAGAAC GTGCAGGCCC AGCAAGGGCC AGCGATGACG
CCAAGGGAAG AGTTCGCCGA GGCCATGCGC AGCGCCGGCC TGTTCACCGG CAGCAACGCC
CAGGGCGATC ACCCGATCAT GGATGGCAAG CGGCACCGCG TGCCGGTCGA GGGCGGCAAG
AAGGGCGCGC TCGATGGCTT CTACGTGGGC CACCTGGACG GGCACCCGGC CGGGCGGATC
ATCAACAACA AGACCGGCAC GGACATTACC TGGAAGAGCA AGGGCTACGC CTTGAGCGAC
CAGGAGAAGG CCAAGCTCCA GGCCGAGGCG GCCGAGAAGC TGGCACAGCG AGCCGTCGAG
CAGGACAAGG CCCAGGAGGC CACCGCGCAG CGCGTCGGTC GGCAGATGGC CGACCTCGTG
CCCATCGAGC AGCCGACGCC CTACCTGCAA GCCAAAGGCA TCCAGGCGCA GGCCGGCGTG
ATGACCGACC GCGAAGGCCA GAAGACCTAC ATCCCGGCCT TCGACGCAGA GGGCAAGCAA
TGGACGATGC AATACATCCA GGAGGACGGC ACTAAGCGGT TCGCCAAGGA CTCGAAGAAG
GAAGGATGCT TCCACCCGGT CGGCGGCATG GACGCCCTGG CGGCCGCGCC GGCGCTGGTG
ATCTCGGAGG GCTACGCCAC GGCGGCCCAG GTGGCCGAGG CCGTGGGCCA CGCCACGGTC
GCCGCCTTCG ACAGCGGCAA CCTTGAGGCC GTGGCGAAGG CGCTGCACGC CAAGTTCCCG
GACAAGCCGA TCATCATCGC CGGCGACGAC GACCGGCACC TGGTCATGAC CCACGGCAAC
AACCCCGGCC GGGAGAAGGC CGAGGCGGCC GCCCAGGCCG TGGGCGGCAA GGCGATCTTC
CCGATCTTCG CGCCGGCCGA GAACACCTAC CCGCGCGACT TGCCCGCCAT CACGCCCGAC
AGCTTCAAGA CCCACCTGCG CGCCGAGCAG CGCCTTGCCG ACGCCGCCGC CGGCAAGGTC
GAGCTGGCCG GCGACGAGGC GGCCAAGCTC AAGGCGTCGA TGTTGAGCGG CGCGCAGATC
GCGGCGCTGT CCACGATGAA GCAGCACACC GACTTCAACG ACTTGGCGCA CAAGAGCGAG
CTGGGCATCG AGGGCGTGAA GCGGCAGATC GGCGCGGCCA TCAGCCAGGT GCAGCGCGAC
GAGCAGCAGC ACCAGGAGCA GAAGCACGTC GAGAAAAAGC AACAGCAGAT CGAGCAGCGC
CCACGGCGGG CCGCTCGCAT CGGATAA
|
|---|
| Protein sequence | MPITKAEAQG VTRAFVRDYP GALELAYKFR EDAAELYGPR AAEVPADMKG GYVPKETLHA
GRAYRGRVDV PLQNVESAGD LLMTLRHEVL GHYGANTFAP GEKRALLDGL AAARNEPTLK
PLWDDVNRRY AGQSLDVRAE EVFALHCEGI EPSQHQVADQ VQQRGQQSFT ETCIARVRPM
QADDLHNIVC MVAQGLRDRS RTQQNFPQFN ELFRRDENME PKKPFHEVVA EKLIEQLKAG
TAPWQKPWEP GEPNAYLPMN PTTGKRYKGI NAIHLMAQGR SDARWMTYKQ AAAVGAQVRK
GEKGTPVQYW KFSEEQDKLD DSGRPVLDAK GQPVKETVML ERPRVFFATV FNGEQIDGLP
PLQPKKEQTW NAVERAEHIL KASGATITHA AGDRAFYRPS TDSITLPERG QFPSSDRYYA
TALHELGHWT GHASRLDRDL AHPFGSEGYA KEELRAEIAS MIVGDELGIG HDPGQHAAYV
GSWIKALQDE PLEVFRAAAD AEKIHDYVLA FEQKQVQEQD QQQSQAQDEA VAQALAVDIA
EVLDNPDVSF SHYQAFQGDT LEDALRSRGL ETVGSITGTD PEQFYAVAHD RLSPVFGIDP
SHTDTDNAYL ERKGLAQEFA NMAEQLHLAQ QLQQHGEQIV SSIDAEARWS DGQRIFAFHD
QDGEPHQVRS LDELNNYAPD QLMALPALTQ QQAAVADQEA NMTPPTNDQA AALLAAHPAD
AVQGIEQAAA ARRQLAAGEI DGQAFADATR QHLGVELPPD WSGELRIVGV AEQDGQTVDA
AQAGIEPQAF QVYARKADAQ FGEDAFAFVA GTRTEGQAEA LTERLHLVDA LGTDNQHERA
AKLARVQEER VRRDPNATEE DISAAKEARK TAEASAMLND SDAQRRAAEL ERQERERQQA
QPQAEKPERQ YINVPYKEKD EAKSLGARWD RQQQSWYVPP GTDAAPFAKW AQGAATAAVE
PRSAQPAPEA QGEAQKPAQQ AQQARQYLAV PYEQRNAAKA AGALWDKAAK SWYVGPRADA
AKLERWKPEN VQAQQGPAMT PREEFAEAMR SAGLFTGSNA QGDHPIMDGK RHRVPVEGGK
KGALDGFYVG HLDGHPAGRI INNKTGTDIT WKSKGYALSD QEKAKLQAEA AEKLAQRAVE
QDKAQEATAQ RVGRQMADLV PIEQPTPYLQ AKGIQAQAGV MTDREGQKTY IPAFDAEGKQ
WTMQYIQEDG TKRFAKDSKK EGCFHPVGGM DALAAAPALV ISEGYATAAQ VAEAVGHATV
AAFDSGNLEA VAKALHAKFP DKPIIIAGDD DRHLVMTHGN NPGREKAEAA AQAVGGKAIF
PIFAPAENTY PRDLPAITPD SFKTHLRAEQ RLADAAAGKV ELAGDEAAKL KASMLSGAQI
AALSTMKQHT DFNDLAHKSE LGIEGVKRQI GAAISQVQRD EQQHQEQKHV EKKQQQIEQR
PRRAARIG
|
|---|
| |