Gene Reut_C6046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_C6046 
Symbol 
ID3607469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007336 
Strand
Start bp182895 
End bp184235 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content64% 
IMG OID637688934 
Productmajor facilitator transporter 
Protein accessionYP_293231 
Protein GI72383877 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00895] benzoate transport 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACCGGC TAGATGTTCA CAAACTGGTC GACGAGGCCA AGTTCAACAG CTTTCACTGG 
TCGGTGCTGA TCTGGTGCTT CGTGATCCTG GTGCTCGACG GGTACGACCT GGCGGTCGCC
GGCACCGCGC TTCCGTCGAT CATGAAGGCG ATGAATGTCG AGGCCGCGAC CGCGGGCTTC
ATGGCCAGTT CGGCGCTGTT CGGCATGATG TTTGGAGCGA TCGCGCTCGG CGCGCTAGCC
GACAAGATCG GCCGCCGCTG GGCGATCTCG ATCTGCGTGT TCCTGTTCAG CGCCTTCACC
GCGGCCGCCG GGTTCACCAA CGACCCGATC ACCTTCAGCG TGATGCGCTT CCTCGCCGGG
CTCGGCATCG GCGGTGCGAT CCCAAATGCG GCCGCGCAGA TGACCGAATA CTCACCGAAG
AAGGTGCGCA GCGTGATGGT CACGCTGATG TGCTGCGGCT ACGCGGTCGG CAGCATCCTC
GCCGCGCTCC TCGGCAAGCA GTTCATCGAG ACCTATGGTT GGCAATCTGT GTTCATCGCC
GCGGGCGCCG CAGTAGTGCT GATCCCGTTC ATCCTGAAGT ACATGCCTGA GTCGCTGCCG
TTCCTGATCA AGCAGCACGA CCACACGCAT CTGCGCGAAG TGGTCCGGAA GATCCGACCG
GACATGCCGC TCGAGCCGCA CGAGGAGTTC CCCGTTCCGG CCGAGGACAA GGCCGAAGGT
CCGACCGTAG GCAGGCTGTT CTTGGACGGC CGGGGCTTCA GCTCGGTGAT GTTCTGGGTC
GCCTACATGA CCTGCCTGTT CATGCTCTAT GCGCTCAGTT CGTGGCTGGT CAAGCTGATG
GGCATGGCCG GCTACAGCCT CGGTTCCGCG CTGAACTTCC TGCTCGCCTA CAACGCCGGT
GCAGTCGTCG GCGCCGTCGG TGGCGGATGG CTCGCCGACA AGCTGAACAT CAAGTGGGTG
ACGGGCGCAT TCTTCGCGGT CGCCGCGGTC TCGCTGACGC TGCTCGGTTA CGGCGCGCAG
CCGCTGTTCC TCATCGTTGC CGTCGTCGGC GCGTCGACGC TGGGCACGCA GATCCTGCTG
TACGCGTATG CCGGGCAGTT CTACCCGACG GCGATCCGTT CGACGGGACT CGGCTTTGCC
TCGGGGGTCG GGCGCATCGG CGCGATCGCG GCGCCAATCG TGATCGGGCT GCTGGTCTCG
ATGAAGCTGC CGCTGGTGCA GAACTTCCTC GCCATTGCAA TGGCCGCGCT GATCGGCGGA
GTCGCGGTTA CGCTGATCAA GCACAAGTCG TCGGCCTCTT CGCACAGCCA CGAAGCGAGC
GCGGTCGGGC AGCAGCCTTG A
 
Protein sequence
MHRLDVHKLV DEAKFNSFHW SVLIWCFVIL VLDGYDLAVA GTALPSIMKA MNVEAATAGF 
MASSALFGMM FGAIALGALA DKIGRRWAIS ICVFLFSAFT AAAGFTNDPI TFSVMRFLAG
LGIGGAIPNA AAQMTEYSPK KVRSVMVTLM CCGYAVGSIL AALLGKQFIE TYGWQSVFIA
AGAAVVLIPF ILKYMPESLP FLIKQHDHTH LREVVRKIRP DMPLEPHEEF PVPAEDKAEG
PTVGRLFLDG RGFSSVMFWV AYMTCLFMLY ALSSWLVKLM GMAGYSLGSA LNFLLAYNAG
AVVGAVGGGW LADKLNIKWV TGAFFAVAAV SLTLLGYGAQ PLFLIVAVVG ASTLGTQILL
YAYAGQFYPT AIRSTGLGFA SGVGRIGAIA APIVIGLLVS MKLPLVQNFL AIAMAALIGG
VAVTLIKHKS SASSHSHEAS AVGQQP