| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_C5971 |
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| Symbol | |
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| ID | 3607509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia eutropha JMP134 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007336 |
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| Strand | - |
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| Start bp | 90944 |
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| End bp | 96595 |
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| Gene Length | 5652 bp |
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| Protein Length | 1883 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637688868 |
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| Product | VCBS |
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| Protein accession | YP_293166 |
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| Protein GI | 72383812 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01965] VCBS repeat
[TIGR03661] type 1 secretion C-terminal target domain (VC_A0849 subclass) |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.151859 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGACAC TGAACGGTAC GAACGGGATT GACAACATCA CTGGAACCGC CTCCAGCGAC
ACTATTCTCA GCGGCAATGG CAATGACTAC GTCTCGGCCG GCGCTGGCAA TGACTACGTC
GACGGCGGTA ATGGCGACGA TATCATCGAA GGTGGCAGCG GCGACGACAC GCTGCTCGGT
GGCAATGGCA AGGACCTCGT GTTCGGCGGC CTGGGCAACG ACACACTACT GGGTGGCAAT
GGGGTCGATG CGGTCTATGG AGGCAGCGGC GACGACGTGA TTGGCAGCCC TGGCGATGGC
ACAACATCGG CCGGCACAGA CAACGGTGGC GACACGCTGT ATGGAGACGG CTTCGATACC
TACGCGGACC TCCTGCTCGG CCGCGGCCAT GAATCGCTGC AGCCTGGCAA TGACCGCATC
TATGGCGGCA ACGGCGATGA CCTGATCTAT GGGGACAATG GCAACAATGC TGCGGTGGGC
GGCAATGATG TGATCTATGG CGGCAACGGC AACGACACCA TCTATGGCGA AGGTGGCAAC
GACGTCATCC AGGGCGGCGC AGGCGCCGAC ACCCTGAGCG GCGGTGATGG CAATGATGTG
TTTGCCTATG CCGCCGTATC CGATTCCACC GCCGCGAGCA TGGATGTCAT TACCGATTTT
GTCCGCGGTG CGGATCACAT AGACCTGCGG CCGGTGCTTG GCGATTCCGG TTTCAATTGG
GGTGGACAGA CACCCACGGC GCACGGCGCG TGGTTCCAGC AGTCGGGCGG GAATACCTTT
GTCTATGTGG ATGTCGACGG CAATCCCGCC AAGGCGGAGA TGGTCATCCG ACTGAACGGG
TTGCATGACC TCACGAAGTC GGATTTTTCT GGCTATGACA ATCACGCCCC GGTCGCCGCC
ACGGACTCGA ATGCGATCCG GGAGGACAAC TCGCCGAATC CGATCAGCGG AAACGTGCTG
TCGAACGACA GCGACGTGGA CGGCAACGTG CTGGCCGTGG CGAATCCGGG CACTTATATA
GGGCAATACG GCACGCTTTC GCTGCATGCC GACGGCAGTT ACGCGTATAC GCTGAATAAC
GGCAGCGGCC AGGTGGATGC GTTGCGGGAA GGCGAGCAGG TTCAGGACGT GTTTAGCTAT
AGCGCGACAG ACGGCCAGGC GAGCACGCCT TCAACGCTCA GTATCCGGAT CACCGGGACG
AACGACAGTG CCACGATCAC TGCTTCAGGC AATGAACACA CCGCGGCGAC GGAAACTGGC
GGCATGAACA ACGCTACGTC GGCCGTTGCG CTGACCGGTG GTACGCTAAC TGTGCATGAC
GTGGACAACG GTGAGGCGCA CTTCGCCGCC GTGCCGTCGG CGAGCCTCGC CGGTACCTAC
GGCACCTTCA CCTTTGACAG CAACACCGGG GCCTGGACCT ACACGCTCGA CAACAGCAAG
GCCGACGCCT TGACCGCCGG CCAGCAGGTC ACCGATTCGC TGACCGTGCA TTCGGCTGAC
CAGACTGCCG AGCAAACCAT CACGGTCAAC ATCACCGGCA GCAACGACAA CGCGACCATC
ACCGCTTCGA GCAGCGAAGA CATCGCCGTG ACCGAAGCCG GCGGTGCCAA TAACGCCACG
CCGGGCGATC CCTCGGCCAG CGGCACGCTG ACCGTGCATG ATGTCGACAG CGGGGAGGCC
CACTTTGCCG CCGTGCCGCC CCAGAGCCTG AGCGGCAACT ATGGCACCTT CACCTTCGAC
ACCAGCACCG GCGCCTGGAC CTACACGCTG GACAACGCGA AGGCCGACGC CCTGACCGCC
GGCCAGCAGG TCACCGACTC GCTGACCGTG CATTCGGCTG ACCAGACTGC CGAGCAGACC
ATCACGGTCA ACATCACCGG CAGCAACGAC AACGCCACCA TTACCACCTC GCCCAGCGAG
GACATGCAGG TGACCGAAGC CGGCGGCGCC AACAACGCCA CGCCGGGCGA TCCCTCGGCC
AGTGGCACGC TGACCGTGCA TGACGTGGAC AGCGGCGAGG CACACTTCGC CGCCGTGCCG
CCCCAGACCC TGAGCGGCAA CTATGGCACC TTCACCTTCG ACAGCAACAC CGGGGGCTGG
ACCTACACGC TGGACAACGC GAAGGCCGAC GCCCTGACCG CCGGCCAGCA GGTCACCGAT
TCGCTGACCG TGCATTCGGC CGACCAGACC GCCGAGCAAA CCATCACGGT CAACATCACC
GGCAGCAACG ACAACGCCAC CATTACCACC TCGCCCAGCG AGGACATGCA GGTGACCGAA
GCCGGCGGCG CCAACAACGC CACGCCGGGC GATCCCTCGG CCAGTGGCAC GCTGACCGTG
CATGACGTGG ACAGCGGCGA GGCACACTTC GCCGCCGTGC CGTCCCAGAG CCTGAGCGGC
AACTACGGCA CCTTCACCTT CGACAGCAAC ACCGAGGCCT GGACCTACAC GCTGGATAAC
GGCAAGGCCG ATGCACTGAC CGCCGGCCAG CACGTCACCG ATTCACTGAC CGTGCATTCG
GCCGACCAGA CCGCCGAGCA AACCATCACG GTCAACATCA CCGGCAGCAA CGACAACGCC
ACTATCACTG CTTCGAGCAG CGAAGACAGC CTCGTGACCG AAGCCGGCGG CGCCAATAAC
GTCACGCCGG GCGATCCGTC GGCCAGTGGC ACGCTGACCG TGCACGATGT CGACAGCGGG
GAAGCCCACT ATGCCGCCGT GCCACCGGCG AGCCTCGCCG GTACCTACGG CACCTTCACC
TTTGACAGCA ACACCGGGGC CTGGACCTAC ACGCTCGACA ACAGCAAGGC CGACGCCTTG
ACCGCCGGCC AGCAGGTGAC CGATTCGCTG ACCGTGCATT CGGCTGACCA GACTGCCGAG
CAAACCATCA CGGTCAACAT CACCGGCAGC AACGACAACG CGACCATCAC CGCTTCGAGC
AGCGAAGACA TCGCCGTGAC CGAAGCCGGC GGTGCCAATA ACGCCACGCC GGGCGATCCC
TCGGCCAGCG GCACGCTGAC CGTGCATGAT GTCGACAGCG GGGAGGCCCA CTTTGCCGCC
GTGCCGCCCC AGAGCCTGAG CGGCAACTAT GGCACCTTCA CCTTCGACAC CAGCACCGGC
GCCTGGACCT ACACGCTGGA CAACGCGAAG GCCGACGCCC TGACCGCCGG CCAGCAGGTC
ACCGATTCGC TGACCGTGCA TTCGGCCGAC CAGACCGCCG AGCAAACCAT CACGGTCAAC
ATCACCGGCA GCAACGACAA CGCCACCATT ACCACCTCGC CCAGCGAGGA CATGCAGGTG
ACCGAAGCCG GCGGCGCCAA CAACGCCACG CCGGGCGATC CCTCGGCCAG CGGCACGCTG
ACCGTGCATG ACGTGGACAG CGGTGAGGCC CACTTTGCCG CCGTGCCGCC CCAGACCCTG
AGCGGCAACT ATGGCACCTT CACCTTCGAC AGCAACACCG GGGGCTGGAC CTACACGCTG
GACAACGCGA AGGCCGACGC CCTGACCGCC GGCCAGCAGG TCACCGATTC GCTGACCGTG
CATTCGGCCG ACCAGACCGC CGAGCAAACC ATCACGGTCA ACATCACCGG CAGCAACGAC
AACGCCACCA TTACCACCTC GCCCAGCGAG GACATGCAGG TGACCGAAGC CGGCGGCGCC
AACAACGCCA CGCCGGGCGA TCCCTCGGCC AGTGGCACGC TGACCGTGCA TGACGTGGAC
AGCGGCGAGG CACACTTCGC CGCCGTGCCG TCCCAGAGCC TGAGCGGCAA CTACGGCACC
TTCACCTTCG ACAGCAACAC CGAGGCCTGG ACCTACACGC TGGATAACGG CAAGGCCGAT
GCACTGACCG CCGGCCAGCA CGTCACCGAT TCACTGACCG TGCATTCGGC CGACCAGACC
GCCGAGCAAA CCATCACGGT CAACATCACC GGCAGCAACG ACACCGCGGT GAACGCCGTC
CCAACCTCAC CACAGACGGT GAACGAAGAC ACGCCACTGA TTTTCAGCAC CGCCAATGGC
AACGGCGTGA GCGTATCCGA CGCAGACAAC GCCACTCATA CGGTCACACT CACCTCTACC
CATGGCGCCA TCACGCTGAA CGGCACCGCC GGCCTGCAGT TCCTGACCGG AGACGGCGCC
GCGGACAGCA CCATGACCTT CACCGGAAGC GATGCGGCCA TCAATGCTGC GCTGAATGGT
ATGTCCTTCC TTGGGGACAA GGACTATGCG GGCACAGCAT CCATGCAGAT CCGTACCGAC
GACGGAACAT CCGCGGACAC CGACACCATT GCCATCATGG TCAATCCCGT CAACGATCCG
CCGGTTGCGG CGGACGACGT GATCTATGCA TCGAACAACA CCGGCGACAT ATTCAGCAGC
CCTAACGGTA TCGTGATCCC GGTCAGTGCC CTGCTCGGCA ACGACACCGA CATTGACGGA
AGCGCCCTGT CCATTACGTC GGTCAGTGCC GGCTCGGGCG CGGTCTCCGG CGTCCAGTTC
GTGCCAGGCT CCAACGACTC CTTGATCACG TTCCAGACCA GCAACGGCAG TGTTGGCACC
TTCTCCTATA CCGTGTCCGA CGGCGCGGGC GGCACCAGCA CGGCTACCGT CACGGTCAAC
GTCGTATCGA CCAACGGCGG CTCGCACGTG GAGCTGACAG GGAACTACCA GGCGTCGTAC
CTCGATGGCG GCAGCAACGG CGACTCCCTG ACTGGTGCCG GCGCGGGCGA TACATTCTTC
GGCGGTGCGG CGGCGGACAC CCTGATTGGC GGGGCCGGCA ACGACGTCCT GCGCGGAGGC
GCCGGCAACG ATAACCTGGA CGGCGGCGCG GGCATCGATA TGCTCGACTT CTCCGATGCA
ACGGGCGGCA TCAACTTCAC ACTGGTACAA AGCAGTGCCG GTACGCAGGT CAACCTGAGC
AGTGTCGGCC TGGACACCGA CACCTACAGC AATATGGAAG GCGTGATCGG GACGAAATAC
AGCGACACGC TCACCGGCAG CGCCGGCAAT GACATCCTCC GCGGCGGCGG GGGCAACGAC
ATCATTGACG GCGGCGCCGG CATTGATTTG CTGGACTTCT CGGACGCCAC CGGCGCGATC
GCCTTCACTC TGACGCAGAG CATCACCAAC ACCGTCGTGA ACCTCACCGG TGTCGGACTC
GGGTCCGACA CATACAGAAA TATGGAGGGC GTGATCGGGT CTGCGTTCAA CGACACCCTG
ACCGGTTCCA CGGGCAACGA TGTGCTGCGG GGCGGCGCCG GCAACGACAC GCTGCTGGGC
GGGGATGGCA ATGACATGCT GATCGGCGGC GCCGGCGCCG ACACGCTGAC GGGCGGCGCC
GGCTCCGATA CCTTCGCCTT TCTCCGTGCC GACGCAGCCT CGGTGGACAC GATTACCGAT
TTCGACGCCA AACCGGTTGC CTCCGGTGGC GACATTCTGG ATCTCGCGGA CCTGCTCTCT
GGCATGAGCG TAACGTCTGC CAACGCGGCG CAGTTCATCC ATCTGTCAGA GGTCGGCGGC
AACACCGTGG TCAGTGTCGA TCGGGATGGT GGCGGCACCG GCGCCGCTTT CCAGGATGTG
GCGGTTCTGC AGGGCGTGGT GGGCATCGAT CTCAACACGC TACTGATTAA CGGCAATATC
CATACGGTTT GA
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| Protein sequence | MATLNGTNGI DNITGTASSD TILSGNGNDY VSAGAGNDYV DGGNGDDIIE GGSGDDTLLG
GNGKDLVFGG LGNDTLLGGN GVDAVYGGSG DDVIGSPGDG TTSAGTDNGG DTLYGDGFDT
YADLLLGRGH ESLQPGNDRI YGGNGDDLIY GDNGNNAAVG GNDVIYGGNG NDTIYGEGGN
DVIQGGAGAD TLSGGDGNDV FAYAAVSDST AASMDVITDF VRGADHIDLR PVLGDSGFNW
GGQTPTAHGA WFQQSGGNTF VYVDVDGNPA KAEMVIRLNG LHDLTKSDFS GYDNHAPVAA
TDSNAIREDN SPNPISGNVL SNDSDVDGNV LAVANPGTYI GQYGTLSLHA DGSYAYTLNN
GSGQVDALRE GEQVQDVFSY SATDGQASTP STLSIRITGT NDSATITASG NEHTAATETG
GMNNATSAVA LTGGTLTVHD VDNGEAHFAA VPSASLAGTY GTFTFDSNTG AWTYTLDNSK
ADALTAGQQV TDSLTVHSAD QTAEQTITVN ITGSNDNATI TASSSEDIAV TEAGGANNAT
PGDPSASGTL TVHDVDSGEA HFAAVPPQSL SGNYGTFTFD TSTGAWTYTL DNAKADALTA
GQQVTDSLTV HSADQTAEQT ITVNITGSND NATITTSPSE DMQVTEAGGA NNATPGDPSA
SGTLTVHDVD SGEAHFAAVP PQTLSGNYGT FTFDSNTGGW TYTLDNAKAD ALTAGQQVTD
SLTVHSADQT AEQTITVNIT GSNDNATITT SPSEDMQVTE AGGANNATPG DPSASGTLTV
HDVDSGEAHF AAVPSQSLSG NYGTFTFDSN TEAWTYTLDN GKADALTAGQ HVTDSLTVHS
ADQTAEQTIT VNITGSNDNA TITASSSEDS LVTEAGGANN VTPGDPSASG TLTVHDVDSG
EAHYAAVPPA SLAGTYGTFT FDSNTGAWTY TLDNSKADAL TAGQQVTDSL TVHSADQTAE
QTITVNITGS NDNATITASS SEDIAVTEAG GANNATPGDP SASGTLTVHD VDSGEAHFAA
VPPQSLSGNY GTFTFDTSTG AWTYTLDNAK ADALTAGQQV TDSLTVHSAD QTAEQTITVN
ITGSNDNATI TTSPSEDMQV TEAGGANNAT PGDPSASGTL TVHDVDSGEA HFAAVPPQTL
SGNYGTFTFD SNTGGWTYTL DNAKADALTA GQQVTDSLTV HSADQTAEQT ITVNITGSND
NATITTSPSE DMQVTEAGGA NNATPGDPSA SGTLTVHDVD SGEAHFAAVP SQSLSGNYGT
FTFDSNTEAW TYTLDNGKAD ALTAGQHVTD SLTVHSADQT AEQTITVNIT GSNDTAVNAV
PTSPQTVNED TPLIFSTANG NGVSVSDADN ATHTVTLTST HGAITLNGTA GLQFLTGDGA
ADSTMTFTGS DAAINAALNG MSFLGDKDYA GTASMQIRTD DGTSADTDTI AIMVNPVNDP
PVAADDVIYA SNNTGDIFSS PNGIVIPVSA LLGNDTDIDG SALSITSVSA GSGAVSGVQF
VPGSNDSLIT FQTSNGSVGT FSYTVSDGAG GTSTATVTVN VVSTNGGSHV ELTGNYQASY
LDGGSNGDSL TGAGAGDTFF GGAAADTLIG GAGNDVLRGG AGNDNLDGGA GIDMLDFSDA
TGGINFTLVQ SSAGTQVNLS SVGLDTDTYS NMEGVIGTKY SDTLTGSAGN DILRGGGGND
IIDGGAGIDL LDFSDATGAI AFTLTQSITN TVVNLTGVGL GSDTYRNMEG VIGSAFNDTL
TGSTGNDVLR GGAGNDTLLG GDGNDMLIGG AGADTLTGGA GSDTFAFLRA DAASVDTITD
FDAKPVASGG DILDLADLLS GMSVTSANAA QFIHLSEVGG NTVVSVDRDG GGTGAAFQDV
AVLQGVVGID LNTLLINGNI HTV
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