| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMN2A_1724 |
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| Symbol | |
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| ID | 3607134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL2A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007335 |
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| Strand | - |
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| Start bp | 391910 |
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| End bp | 392902 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637688615 |
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| Product | dihydrouridine synthase TIM-barrel protein nifR3 |
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| Protein accession | YP_292915 |
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| Protein GI | 72383560 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family
[TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGAGT TTTCTCCGAT TTGTTTGTCA GGCAATGGGA CACCTAGATC TCTAGAGTGT
CTGGTTATTC AGTCCCCACT TGCAGGAGTA AGCGATCAAA TATTCAGGAA CTTTGTTCGT
AGATGGTCTC CAAAAGCTTT ACTTTTCACC GAAATGGTAA ATGCTAAAAG TCTTGAATTA
GGTCATGGTG AAGAGAAAGT AATTGAGCTT TCAGAAGAAA GTGGTCCAAT TGGTGTTCAA
CTTTTTGACC ATAGGCCAGA TTCAATGGTA GATGCTGCCA TCAAAGCCGA ATCATCTGGT
GCATTTCTTA TAGATATCAA TATGGGTTGC CCAGTAAAAA AAATTGCCAG GAAAGGAGGC
GGAAGTGCTC TATTGAAAGA ACCAGAACTT GCACAATTAA TCGTCAAAAA GGTTTCAAAA
GCCATATCTA TTCCAGTAAC AGTCAAAATA AGATTGGGGT GGTGTGAAAC CACAAGTGAT
CCAGTATCTT TTGCTTTAGG TCTACAGGAG GCTGGGGCTC AACTCATAAC TGTTCATGGG
CGAACAAGAA GGCAAGGATT TTCTGGCCAT GCAAACTGGA AAGCTATTGC AAAAATCAAA
AAGTCATTAG ATATACCTGT CATCGCTAAT GGTGATATTA AAAACTCTCG AGATGCTATT
GAGTGCCTAA AGATCACGAA TGCCGATGGG GTGATGATAG GAAGGGCAAG TATGGGAGCC
CCATGGCTAG TTGGACAAAT TGATGAAGAA ATTAAGAACC AAACAACTTT TAAACCACCT
GACGCAAAGA TGAAAGTGAG TTTATCTTTA GAGCACCTAA AATTACTTGT TTCAAAGAAA
GGAAATCATG GGCTTTTGAT TGCTAGGAAA CATATGAATT GGACTTGTAG AGGTTTTGAA
GGTGCGTCTA ATCTTCGCCA TAAATTAGTT AGAGCACGCA CTCCAAACGA CGCAATTAAA
CTACTGGAAG ACGAACTGCT TAAATTCAAC TAA
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| Protein sequence | MKEFSPICLS GNGTPRSLEC LVIQSPLAGV SDQIFRNFVR RWSPKALLFT EMVNAKSLEL
GHGEEKVIEL SEESGPIGVQ LFDHRPDSMV DAAIKAESSG AFLIDINMGC PVKKIARKGG
GSALLKEPEL AQLIVKKVSK AISIPVTVKI RLGWCETTSD PVSFALGLQE AGAQLITVHG
RTRRQGFSGH ANWKAIAKIK KSLDIPVIAN GDIKNSRDAI ECLKITNADG VMIGRASMGA
PWLVGQIDEE IKNQTTFKPP DAKMKVSLSL EHLKLLVSKK GNHGLLIARK HMNWTCRGFE
GASNLRHKLV RARTPNDAIK LLEDELLKFN
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