Gene PMN2A_1701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1701 
Symbol 
ID3607104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp366172 
End bp367482 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content38% 
IMG OID637688585 
Productcarboxyl-terminal protease 
Protein accessionYP_292892 
Protein GI72383537 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0793] Periplasmic protease 
TIGRFAM ID[TIGR00225] C-terminal peptidase (prc) 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCTCAT CTGTTAAATC TTTAACTAAG CCACTGCAAA GACTTTTTGC AGTATTAATT 
AGCTTTGGGA TTTTATTTCA AGTCTTTACT CAGCCCGCTT TTGCCCTAAA TGATGGACAA
TTGCTTGTTA TTGAGGCATG GAATCAAGTA AATGCGGGTT ATTTAGATCC TAAGAAATTT
GATGAAATTC AATGGAAAAA ACTTCGTCAA AAAGCTCTTG AAAAGCCAAT AAACAATTCT
CAACAAGCCT ATTCAGCTAT TGAAGCAATG CTTCTTCCTC TTGGAGATCC ATATACGCGC
TTATTAAGAC CAGTTGATTA CGAGGCGATG AAGAAAAGTA ACATAGGTAG TGAAATCAAT
GGAGTTGGAC TTCAATTAGG AGCGAGAAAA GAAGATGGAG ACATAGTCGT AATATCTCCT
CTTGAAGGCT CTCCAGCATC GGATGCAGGA ATTACAAGTG GAACGATTAT AAAAAAAGTC
AACGGGCAAT CCCCAAAACA ACTAGGTCTA GAAGCAACAG CCGCAAAATT GAGAGGCCAA
ACTGGAACAC AAGTAATCGT TGAATTAGAG CAACCTGACA ATGAAATAAA AGAAATTTCT
TTAGAAAGAA GAAGTGTTGA TTTAAGACCA GTTAGAACTA AGAGAATAAG GAACGAATCA
CATACATTTG GTTATTTAAG AATTACACAA TTTAGTGAGG GAGTCCCTGA GCAAGTCAAG
GAAGCATTGG AAGAACTTTC TGGGAAAGAC ATAGATGGAC TAATTTTGGA CCTAAGAAAT
AATTCTGGAG GTCTTGTAAG TTCTGGACTC GCAGTTGCTG ACGATTTCCT CAGCGATATG
CCGATTGTTG AAACAAAAAA AAGAGATTCC ATAAATGATC CCATCAGTTC TGGACTAGAA
ACTATTTATG ATGGGCCAAT GGTTACTCTT GTAAATGAGG GGACAGCAAG TGCTAGTGAA
ATTCTTGCTG GTGCTCTTCA GGATAATAAA AGATCTGAAC TCATAGGTAA TAAAACTTTT
GGGAAAGGCC TCATACAATC TTTGACCAAT CTTAGTGATG GCAGTGGTTT AGCTGTAACA
GTTGCTAGTT ATCTAACTCC TAGTGGAAGA GACATACAAA ATCTAGGAAT TGATCCTGAT
CGCCTCTTGG AAATGCCAGA GCCACTTAAT CCAGGCTCTG ATGAAGATAG ATGGCTTTTA
GATGCAGAGC TGATAATGCA AGCCACCTTG GACAAAGAAG AAGTCTCAGA AAAATTATCA
AAAGAGACTT TAGTGAAAGA AGAACAATTA ATAAGCCAAG AAATTGAATA A
 
Protein sequence
MLSSVKSLTK PLQRLFAVLI SFGILFQVFT QPAFALNDGQ LLVIEAWNQV NAGYLDPKKF 
DEIQWKKLRQ KALEKPINNS QQAYSAIEAM LLPLGDPYTR LLRPVDYEAM KKSNIGSEIN
GVGLQLGARK EDGDIVVISP LEGSPASDAG ITSGTIIKKV NGQSPKQLGL EATAAKLRGQ
TGTQVIVELE QPDNEIKEIS LERRSVDLRP VRTKRIRNES HTFGYLRITQ FSEGVPEQVK
EALEELSGKD IDGLILDLRN NSGGLVSSGL AVADDFLSDM PIVETKKRDS INDPISSGLE
TIYDGPMVTL VNEGTASASE ILAGALQDNK RSELIGNKTF GKGLIQSLTN LSDGSGLAVT
VASYLTPSGR DIQNLGIDPD RLLEMPEPLN PGSDEDRWLL DAELIMQATL DKEEVSEKLS
KETLVKEEQL ISQEIE