Gene PMN2A_1624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1624 
SymbolglyA 
ID3607023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp292694 
End bp293929 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content38% 
IMG OID637688503 
Productserine hydroxymethyltransferase 
Protein accessionYP_292815 
Protein GI72383460 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0112] Glycine/serine hydroxymethyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATGTG ATCCAAGTAT TGCGAAATTA ATAAACAATG AATTATCAAG ACAAGAAACT 
CATTTAGAGC TTATCGCAAG CGAGAATTTT GCTTCTAAGG CCGTAATGGA AGCCCAAGGA
TCAGTCCTAA CAAATAAATA TGCTGAAGGT CTCCCTAACA AACGTTATTA CGGAGGATGT
GAGTATGTAG ACGGAGTTGA GCAACTAGCA ATAGATAGAG CAAAAAACCT TTTTGGTGCC
AACTGGGCAA ACGTCCAACC ACACAGCGGA GCTCAAGCTA ACTTTGCAGT TTTCCTTAGC
CTTCTAAAGC CAGGGGACAC AATCATGGGA ATGGACTTAT CTCATGGAGG ACACCTCACG
CATGGTTCAC CTGTAAATGT AAGCGGCAAA TGGTTTAAAA CTTGCCATTA CGAAGTTGAT
AAAAAGACTG AAATGCTCGA TATGGATGCA ATAAGAAAAA AAGCAATTGA AAATCAACCT
AAATTAATTA TCTGTGGATT CTCTGCCTAT CCACGAAAAA TTGACTTCAA AGCTTTCAGA
TCAATAGCTG ATGAGGTAAA TGCTTATTTA TTAGCTGATA TTGCTCATAT TGCTGGTTTA
GTGGCAAGTG GACTTCACCC AAGTCCAATC CCATATTGTG ATGTAGTTAC AACAACTACT
CACAAAACTC TTAGAGGGCC AAGGGGTGGA CTAATCCTCT CAAAAGATAA GGAGATAGGA
AAAAAGCTTG ATAAAGCAGT ATTTCCTGGC ACCCAAGGAG GTCCTTTAGA ACATGTAATC
GCAGCCAAGG CTGTTGCATT CAAAGAAGCT TCTGCACCCG AATTCAAGAT CTATAGCCAA
AAAGTAATCT CAAATGCAAA AGTTCTTTCT AATCAACTTC AAAAAAGAGG AATTTCAATT
GTAAGCAAAG GAACTGACAA TCATATAGTT CTTCTTGACC TTAGAAGCAT TGGTATGACA
GGTAAAGTTG CTGATCAATT AGTAAGTGAT ATTAAAATAA CCGCGAACAA AAACACTGTA
CCTTTTGACC CAGAGTCCCC ATTTGTTACT AGTGGGCTAA GGCTAGGTTC AGCAGCCCTT
ACGACTAGAG GTTTTAATGA ACAAGCCTTT GGAGATGTTG GTAATGTCAT TGCAGATAGA
CTACTTAACC CTAATGATGA AGATATAAAG GAAAAGTCAA TCAATAAAGT ATCTGAACTT
TGCAATAAGT TTCCTTTATA TAGTGAAAAC ATCTAA
 
Protein sequence
MKCDPSIAKL INNELSRQET HLELIASENF ASKAVMEAQG SVLTNKYAEG LPNKRYYGGC 
EYVDGVEQLA IDRAKNLFGA NWANVQPHSG AQANFAVFLS LLKPGDTIMG MDLSHGGHLT
HGSPVNVSGK WFKTCHYEVD KKTEMLDMDA IRKKAIENQP KLIICGFSAY PRKIDFKAFR
SIADEVNAYL LADIAHIAGL VASGLHPSPI PYCDVVTTTT HKTLRGPRGG LILSKDKEIG
KKLDKAVFPG TQGGPLEHVI AAKAVAFKEA SAPEFKIYSQ KVISNAKVLS NQLQKRGISI
VSKGTDNHIV LLDLRSIGMT GKVADQLVSD IKITANKNTV PFDPESPFVT SGLRLGSAAL
TTRGFNEQAF GDVGNVIADR LLNPNDEDIK EKSINKVSEL CNKFPLYSEN I