Gene PMN2A_1516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1516 
Symbol 
ID3606914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp189447 
End bp191063 
Gene Length1617 bp 
Protein Length538 aa 
Translation table11 
GC content38% 
IMG OID637688394 
ProductNAD(P)H-quinone oxidoreductase subunit 4 
Protein accessionYP_292707 
Protein GI72383352 
COG category[C] Energy production and conversion 
COG ID[COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) 
TIGRFAM ID[TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAATTC CTGAGCCAAT TCTAGCCCAT TTCCCTTGGT TAAGTTTATC CATATTCTTT 
CCCATTGTTG GGGCATTAAT TGTTCCTTTT ATTCCAGATA AAGGAGAAGG GAAAGAAGTT
CGATGGTATG CACTAATAAT TGCTTTAATT ACTTTTCTAA TTACTGTTGC TGCTTACTTC
AAAGGCTTTG ATCCAAGTCA AGAAGGCTTG CAATTGTATG AAAAAGTTAG TTGGCTCCCC
GATCTTGGAT TGACTTGGTC TGTTGGAGCA GATGGCTTGT CAATGCCATT GATATTGCTT
ACAAGTTTCA TAACTTCTCT TGCAGTTTTG GCAGCATGGC CAGTTAGCTA TAAACCAAAA
TTATTTTTCT TTTTAATTCT TGCTATGGAT GGCGGCCAGA TAGCTGTCTT TGCAGTTCAA
GATATGTTGC TTTTCTTTCT AGCTTGGGAA TTGGAGTTAT TCCCGGTGTA TTTATTCCTG
GCAATCTGGG GCGGAAAGAA AAGGCAATAT GCGGCGACAA AATTTATTAT CTACACAGCA
GGCAGCTCGT TATTTATTCT TCTTGCTGGT CTTGCAATGG GTTTCTTTCA AGGTGGAGGA
ATGCCAGATT TTGGATATAC CCATTTAGCT CAGCAAAATT TTGGTAAGGG GTTTCAACTA
CTTTGTTATT CAGGATTACT AATAGCTTTT GGCGTCAAAC TACCTATTGT TCCTCTTCAT
ACTTGGTTGC CAGACGCCCA TGGAGAGGCC ACTGCTCCCG TGCATATGCT CCTGGCAGGA
ATACTTTTAA AGATGGGTGG ATATGCTCTC CTTAGATTTA ATGCACAATT ACTGCCTGAT
GCTCATGCCC AATTTGCACC ATTGTTAATT GTTCTGGGCG TAGTCAATAT TATTTATGCA
GCTTTAACTT CTTTTGCTCA AAGAAATTTA AAAAGGAAAA TTGCATACAG CTCAATAAGT
CATATGGGTT TTGTTTTGAT AGGTATTGGA AGCTTTAGTT CTCTAGGAAC TAGTGGTGCG
ATGTTGCAAA TGGTTAGCCA CGGTTTAATA GGAGCAAGCT TGTTTTTCCT TGTTGGTGCA
ACTTACGACA GAACTCACAC TCTTCAATTA GATGAGATGG GTGGTATCGG CCAAAACATG
AGGATTATGT TTGCTTTATG GACTGCATGC GCTTTTGCTT CTCTTGCTTT ACCTGGAATG
AGTGGATTTA TCTCAGAATT AATGGTCTTT GTTGGGTTTG TAACTGATGA AGTTTATACA
CTTCCATTTA GAATTGTTGT TGCTTCATTG GCTGCAATAG GAGTCATTTT GACACCTATA
TATTTATTAT CGATGCTTAG AGAAATTTTC TTTGGGAAAG AGAATGCGAA GTTAATATCC
AAAGCAAAGT TGGTAGATGC AGAACCTAGA GAGATTTATA TTATTGCTTG TTTATTAGTT
CCAATTATTG GTATTGGTTT GTATCCCAAA ATCATGACTG ATACTTACAT ATCATCAATT
GATGGATTGG TTAAAAGAGA TTTGTTAGCT GTTGAGAGGA TTAGAAGTGA TCAAACAACA
ATTATTAGTA ATTCAAATTT ATCAATTGGG ACTATTGAAG CCCCTCTACT TGATTGA
 
Protein sequence
MLIPEPILAH FPWLSLSIFF PIVGALIVPF IPDKGEGKEV RWYALIIALI TFLITVAAYF 
KGFDPSQEGL QLYEKVSWLP DLGLTWSVGA DGLSMPLILL TSFITSLAVL AAWPVSYKPK
LFFFLILAMD GGQIAVFAVQ DMLLFFLAWE LELFPVYLFL AIWGGKKRQY AATKFIIYTA
GSSLFILLAG LAMGFFQGGG MPDFGYTHLA QQNFGKGFQL LCYSGLLIAF GVKLPIVPLH
TWLPDAHGEA TAPVHMLLAG ILLKMGGYAL LRFNAQLLPD AHAQFAPLLI VLGVVNIIYA
ALTSFAQRNL KRKIAYSSIS HMGFVLIGIG SFSSLGTSGA MLQMVSHGLI GASLFFLVGA
TYDRTHTLQL DEMGGIGQNM RIMFALWTAC AFASLALPGM SGFISELMVF VGFVTDEVYT
LPFRIVVASL AAIGVILTPI YLLSMLREIF FGKENAKLIS KAKLVDAEPR EIYIIACLLV
PIIGIGLYPK IMTDTYISSI DGLVKRDLLA VERIRSDQTT IISNSNLSIG TIEAPLLD