Gene PMN2A_1500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1500 
Symbol 
ID3606898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp174504 
End bp175250 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content39% 
IMG OID637688378 
Producttwo component transcriptional regulator 
Protein accessionYP_292691 
Protein GI72383336 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGCCA CAAGTCCCTC AAAGGAAACC ATCCTCGTAG CTGATGATGA GGCAAGTATT 
AGGAGGATCC TAGAAACTCG CCTATCCATG ATTGGCTATC AGGTAGTTAC TGCTTGTGAT
GGAAATGAGG CTTTGGATCT TTTCAGGAAT TGTGAGCCTG ATTTGGTTGT ACTCGATGTC
ATGATGCCTA AATTAGATGG ATATGGAGTT TGCCAGGAAC TAAGAAAGGA ATCAGATGTT
CCGATAGTTA TGCTGACAGC CTTGGGAGAT GTTGCAGATA GAATTACTGG ACTTGAGCTA
GGTGCTGATG ATTATGTTGT TAAACCATTT AGCCCAAAAG AATTAGAAGC TAGAATCAGA
TGTGTATTAA GAAGGGTAGA GAAAGAACAA ATAGCAGGAC TTCCTAATTC AGGTGTCATT
GCGGTTATGA ATTTAAAGAT TGATACAAAT AAGCGTCAGG TTTATAGAAA CGATGAACGA
ATTCGATTAA CAGGTATGGA ATTTAGTCTT TTAGAACTGT TGGTTAGTCG TTCAGGAGAA
CCTTTTAGTC GAGGTGAGAT TCTTAAAGAA GTTTGGGGAT ATACCCCTGA AAGACATGTT
GATACGAGAG TAGTGGATGT TCATATTTCT AGACTTAGAT CAAAACTTGA GGATGATCCT
GCAAATCCAG AACTAATACT TACTGCAAGA GGAACAGGTT ATCTTTTTCA AAGAATTGTT
GACTCTATGA TTCCTGAAGG ATCATAA
 
Protein sequence
MTATSPSKET ILVADDEASI RRILETRLSM IGYQVVTACD GNEALDLFRN CEPDLVVLDV 
MMPKLDGYGV CQELRKESDV PIVMLTALGD VADRITGLEL GADDYVVKPF SPKELEARIR
CVLRRVEKEQ IAGLPNSGVI AVMNLKIDTN KRQVYRNDER IRLTGMEFSL LELLVSRSGE
PFSRGEILKE VWGYTPERHV DTRVVDVHIS RLRSKLEDDP ANPELILTAR GTGYLFQRIV
DSMIPEGS