Gene PMN2A_1496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1496 
Symbol 
ID3606894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand- 
Start bp169355 
End bp169990 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content33% 
IMG OID637688374 
Productthymidylate kinase 
Protein accessionYP_292687 
Protein GI72383332 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID[TIGR00041] thymidylate kinase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0919131 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGGAA AGTTTATTGT TTTTGAGGGT ATTGATGGCT CGGGTAAAAC CACTCAAATC 
AATCAATTAT CCAAATGGCT TATTAGTTCC GACCTCATAC CTGAAAACAA TAAATTAGTC 
ATCACTAGAG AGCCAGGAGG AACAAAATTA GGAAAATCAA TAAGATCGCT TCTACTAGAT 
ACTTCCATAG AAAAAAGCCC AGATTCTATT ACTGAGCTTT TGCTTTATGC CGCAGATAGA 
TCACAACATA TCAATGAAAT TATTCGCCCA ACTTTAGATC AAGGGGATTG GGTAATAAGC 
GATAGATTTT GTGGATCAAC ACTTGCTTAT CAAGGTTATG GAAGGAAGTT AGATATCAAT 
TTAATTAAGG ATCTCGAAGC AATAGCGACG CAGGGAATTG CTCCAGATAT TACATTTCTA 
TTAGACATTC CCATTGAAGA AAGTATAAGA AGAAGAAGAA ATAGAAAAGA TGATCGAATA 
GAAAAAGAAG GTAGAGAGTT TTTATCCAAT GTTTCTCTCG GCTTTCAAGC ATTGTCCGAG 
GACAGTAACT GGAAAAAAAT ATCTGCTATT GACTCTAAAG AAAAAATCAT ATCTGAGATT 
AAATCTGAAA TAAAAAAATT AATAAAAAAC AAATAA
 
Protein sequence
MKGKFIVFEG IDGSGKTTQI NQLSKWLISS DLIPENNKLV ITREPGGTKL GKSIRSLLLD 
TSIEKSPDSI TELLLYAADR SQHINEIIRP TLDQGDWVIS DRFCGSTLAY QGYGRKLDIN 
LIKDLEAIAT QGIAPDITFL LDIPIEESIR RRRNRKDDRI EKEGREFLSN VSLGFQALSE 
DSNWKKISAI DSKEKIISEI KSEIKKLIKN K