Gene PMN2A_1494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1494 
Symbol 
ID3606892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp167600 
End bp168397 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content39% 
IMG OID637688372 
Producttwo component transcriptional regulator 
Protein accessionYP_292685 
Protein GI72383330 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.213712 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCCTT GCATTTTACT CATTGAAGAT GACCAAGACA TGAGAGATCT GGTTGCAGGG 
CATCTTGAGC ACACTGGTTT TGATGTCCAA AAAGCAGAGG ACGGAATCAA GGGCCAAGCT
TTAGCTCTGC AATACGCGCC TGATCTAATT CTCCTTGATT TAATGCTTCC TAAAGTTGAT
GGTTTAACTC TTTGTCAGCG GTTAAGAAGA GATGAGAGAA CATCAGCAAT ACCTATTCTT
ATGATTACTG CTTTAGGTGG AATTAAAGAT AAAGTTACGG GTTTTAATTC TGGTGCAGAT
GATTACATCA CAAAACCATT CGATCTTGAG GAATTACAAG TAAGGATCAA GGCGTTGTTA
AGAAGAACTA ATCGTGCACC ACTGGGAAGT AATAATCAGC AAGAAATACT CGATTATGGC
CCTCTTACAC TTGTTCCTGA AAGATTTGAG GCGATATGGT TCGAATCTCC AGTTCGTTTG
ACTCATTTAG AATTTGAATT GCTCCATTGT TTGATGCAAA GGCATGGGCA GACAGTTGCA
CCCTCTTTAA TTCTTAAAGA AGTTTGGGGT TACGAGCCTG ATGATGATAT TGAGACTATT
AGGGTGCATG TAAGACATTT AAGAACCAAG CTTGAACCTG ATCCAAGGAA ACCAAGATTC
ATCAAAACTG TATACGGTGC AGGATATTGC TTGGAATTAC CAACAGGGGA CAAAATAAGT
GAGATTCAAC CTTCAATAAC TCAAGCTAGA GAAACTAACT CTTTCAAAAA TAATACAGAT
GAAAGAGTGA TTGCTTAA
 
Protein sequence
MKPCILLIED DQDMRDLVAG HLEHTGFDVQ KAEDGIKGQA LALQYAPDLI LLDLMLPKVD 
GLTLCQRLRR DERTSAIPIL MITALGGIKD KVTGFNSGAD DYITKPFDLE ELQVRIKALL
RRTNRAPLGS NNQQEILDYG PLTLVPERFE AIWFESPVRL THLEFELLHC LMQRHGQTVA
PSLILKEVWG YEPDDDIETI RVHVRHLRTK LEPDPRKPRF IKTVYGAGYC LELPTGDKIS
EIQPSITQAR ETNSFKNNTD ERVIA