Gene PMN2A_1376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1376 
Symbol 
ID3606771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp51069 
End bp52844 
Gene Length1776 bp 
Protein Length591 aa 
Translation table11 
GC content36% 
IMG OID637688251 
Productmetallo-beta-lactamase domain-containing protein 
Protein accessionYP_292567 
Protein GI72383212 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0426] Uncharacterized flavoproteins
[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTTTA CTAAATCGAC AGCTTTAGAA AATCAGAAAA GTGATATTCC TAAGCTTTCA 
CTGCAATATG AACAAATTGC TATAGATACT CACACTTTAA GATCATTGGA TTGGGATCGA
AGCAGGTTTG ATATTGAATT TGGCCTTCGA AATGGGACAA CTTATAATAG CTTTTTAATA
AGAGGCAAAA AAACTGCACT TATAGATACA AGTCATTTAA AGTTTAAAGA TATTTGGTTT
GAAAAACTAA GACAAGAAAT CAATCCAACA GAAATTGATT ATTTAATAGT CAGTCACACA
GAGCCAGATC ATTCAGGACT GATAAAATAT TTAATTGAAT TAAACCCAAA TATTGAAATC
GTCGCATCTA AAGTAGCTAT AAAATTCTTA AAAGACCAAA TTCATCAACC TTTTAAGTCA
AGAGCAGTCA AAAGCGGTGA AGAAATCAAT TTAGAAAGTA CTTCAATCAG CGGAATTGAG
CATAGAATTG AATTTATTAG TGCACCAAAT CTACACTGGC CAGATACGAT TTTTTCTTTT
GATCACGGTA CACAAGTTTT ATATACCTGT GACGCATTTG GTTTACATTA CTGTTCAGAA
AAATTATATG ACGAAAATCC AAGTCTATTA AATGAAGATT TTCGATTTTA TTATGACTGC
CTCATGGGTC CAAATGCCCG AAGCGTAGTT CAGGCATTAA AAAAAATTGA TTCATTACCA
ACTATCCAGA CTATTGGTGT TGGGCATGGA CCAATCCTGA ATTTTAATAC GCAGTTATGG
CTGAATCATT ACAGAGAATG GAGTACGCAA AGAAGCACGG GCGAAAACTA TGCTGTGGTT
TGCTATCTCA GTCAATATGG TTATTGTGAC CGGTTAAGCC AAGCGATTGC TCATGGAATA
GGCAAGGCAA ATGCCCAAGT CCAATTAGTT GATCTTATTG CTTCAGATAC TCAAGAGTTA
AGTGCTCTAA TTAGTGAAGC GAGTGCAGTC GTTGTGCCTA CATGGCCTAT CAAAACTGAT
TCAGAATTAC AAAGCAATAT TGGAACACTT CTAGCATCCT TAAAACAAAA GCAATGGGTA
GCCACTTATG ACTCATATGG CGGAAATGAA GAGCCTATTG ACTTTATAAC TAACCAATTA
AGAAAGCTTG GACAAAAAGA AGCATTTAAA CCACTTCGAG TTCGTGACGA ACCAAACAAA
AGTGTTTACC AACAATTTGA AGAGGCTGGT ACAGATTTAG GTCAAATTCT TACTAGAAAG
AAAAATATAG CTGCTACTAA GAGCCTTGAT GGAGACTTAA ATAAAGCGCT AGGTTGCCTA
AGCGGTGGAC TTTACGTTGT TACAGCAAAA GACAATGAAG GTGCTGATAG TCGAGACGGT
GCGATGGTTG CAAGTTGGGT AAGTCAAGCA AGTTTTGACC CCCCTGGGAT AACCGTAGCG
GTAGCTAAAG ACAGAGCAAT TGAATCACTA TTACAAGTCA ATGATCGTTT TGTTCTGAAT
ATCCTTCAAG AAAATAACTA TTTGCACCTC TTCAGACACT TTTTAAAACG TTTTCCACCA
GGTGCTAATC GATTTGAAGG AGTTGAATTA ATGAATGATC TTGCAGCTGG GGGACCAGTG
CTATCTGATG CGTTAGCGTT CCTTTCATGT AAAGTTATTC AAAGAATGGA GACAACAGAT
CATTGGATCA TTTATTCATC AGTTGAAAAA GGTAATTTAT CTAATACTCA AAGTAAAACA
GCAGTTCATC ACAGAAGACT TGGTAGTAAT TATTAA
 
Protein sequence
MIFTKSTALE NQKSDIPKLS LQYEQIAIDT HTLRSLDWDR SRFDIEFGLR NGTTYNSFLI 
RGKKTALIDT SHLKFKDIWF EKLRQEINPT EIDYLIVSHT EPDHSGLIKY LIELNPNIEI
VASKVAIKFL KDQIHQPFKS RAVKSGEEIN LESTSISGIE HRIEFISAPN LHWPDTIFSF
DHGTQVLYTC DAFGLHYCSE KLYDENPSLL NEDFRFYYDC LMGPNARSVV QALKKIDSLP
TIQTIGVGHG PILNFNTQLW LNHYREWSTQ RSTGENYAVV CYLSQYGYCD RLSQAIAHGI
GKANAQVQLV DLIASDTQEL SALISEASAV VVPTWPIKTD SELQSNIGTL LASLKQKQWV
ATYDSYGGNE EPIDFITNQL RKLGQKEAFK PLRVRDEPNK SVYQQFEEAG TDLGQILTRK
KNIAATKSLD GDLNKALGCL SGGLYVVTAK DNEGADSRDG AMVASWVSQA SFDPPGITVA
VAKDRAIESL LQVNDRFVLN ILQENNYLHL FRHFLKRFPP GANRFEGVEL MNDLAAGGPV
LSDALAFLSC KVIQRMETTD HWIIYSSVEK GNLSNTQSKT AVHHRRLGSN Y