Gene PMN2A_1316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1316 
SymbolrpsF 
ID3606711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1828079 
End bp1828495 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content39% 
IMG OID637688192 
Product30S ribosomal protein S6 
Protein accessionYP_292508 
Protein GI72383153 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0360] Ribosomal protein S6 
TIGRFAM ID[TIGR00166] ribosomal protein S6 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGAAC AACCCTATTA CGAAACCATG TACATTCTTC GCCCGGATAT ACCGGAAGAA 
GAAGTTGATA GCCATTTAAA AAAATATAGT GAGATTCTTG AGAAGTCTGA AACGGAAGTA
TTAGATAGTC AAATGAGAGG CAAAAGAAGA CTTGCCTATC CCATTGCAAA ACATAAAGAA
GGAATATATG TGCAATTGAG CCACAAAGGC AACGGACAAC AAGTTGCAAC CTTAGAGAGA
GCCATGAGGT TAAGTGAGGA CGTTATTCGC TACATCACAG TTAAACAAGA TGGTCCTTTG
CCAACTCCAA AACCAACTTC TAAAGAAAAC GAACCAGAAA AGGAAGAAGT AAAACCTACC
GAAGAAAAAA CTGAATCACC TTCCAAAGAC GAGAAGAAAG AAGACTCTAA GGAATAA
 
Protein sequence
MSEQPYYETM YILRPDIPEE EVDSHLKKYS EILEKSETEV LDSQMRGKRR LAYPIAKHKE 
GIYVQLSHKG NGQQVATLER AMRLSEDVIR YITVKQDGPL PTPKPTSKEN EPEKEEVKPT
EEKTESPSKD EKKEDSKE