Gene PMN2A_1280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1280 
Symbol 
ID3606674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand- 
Start bp1787400 
End bp1788023 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content34% 
IMG OID637688156 
Producthypothetical protein 
Protein accessionYP_292473 
Protein GI72383118 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.932372 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCAAA ACATAGAAAC TCTAGTCAAT AATTTTATTC CTTTTTTAAG CAGTCCTTTA 
GGAATTTTGG GTTTTGCTTT GGTTTATGTT TTTTGGGTGT CTTGCTTGCT GCCAGGCTCC 
TGGCTTTCCA TGTTGTCTGG CTTTCTTTAT GGAACCTGGC TTGGAAGTTC GGTTGTTTTT 
GTAGGTGCTT TTGTTGGAGC TCATCTAACT TTTTATTTAG GGAGAACTTT TTTAAAAGAA 
TGGGCTCAAA GCAAGGTCTC GAATTTTCCA AAAGTTCAAA TTATGGAGAA GGCTGTTAAA 
CGCGAGGGTC TGAAAGTCAT TCTTTTAACT AGACTTTCTC CTCTTTTTCC ATTTGGCTTA 
CTTAATTTTA CTTATGGCTT GAGCGATGTA AAAGTTCGTG ATTTTACTAT TGGAATGTTT 
GGTATATTAC CTGGCACAAT TTTATATTGC AGCTTAGGTT CCTTAGCACT TAAAGTTTCA 
AGTTTTGGCG AAGTACTTTC TGGAAGATCT GATACAAGTT CATTTATTTG GAGCTTAATT 
AGTATCTTTT CAACAATTTT AATTGTTATT TTAGTTTTAC GTTCAACAAG AAAAATAAAT 
CAGGATTCTA AATCCTTAGA TTAA
 
Protein sequence
MTQNIETLVN NFIPFLSSPL GILGFALVYV FWVSCLLPGS WLSMLSGFLY GTWLGSSVVF 
VGAFVGAHLT FYLGRTFLKE WAQSKVSNFP KVQIMEKAVK REGLKVILLT RLSPLFPFGL 
LNFTYGLSDV KVRDFTIGMF GILPGTILYC SLGSLALKVS SFGEVLSGRS DTSSFIWSLI 
SIFSTILIVI LVLRSTRKIN QDSKSLD