Gene PMN2A_1265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1265 
Symbol 
ID3606659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1770880 
End bp1772028 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content40% 
IMG OID637688141 
ProductSqdX 
Protein accessionYP_292458 
Protein GI72383103 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAATAG CTTTCTTTAC AGAAACTTTC CTACCCAAAG TTGATGGAAT AGTCACTCGT 
TTAACTAAAA CAATTCAAAA TCTAGTTGCA TCTGGTGATG AAGTAACCGT TTTTTGTCCA
GAAGGCTGTC CATCAAGCTA TATGGGTGCA AAAGTTGTAG GTGTCCCTGC GATGCCATTA
CCTTTATATC CAGAACTCAA GCTAGGACTC CCTGGCCCAG GTGTTTCAGA TGAATTAGAA
AACTTTAAAC CTGACTTAAT ACATGTCGTC AACCCTGCGG TGCTTGGATT GGGTGGTATT
TGGCTAGCCA AAACAAACAA TATCCCCCTT GTAGCCAGTT ACCACACTCA TTTACCAAAG
TATTTAGAAC ACTATGGAAT GGGAATGTTA GAGCCGCTTT TATGGGAATT GTTAAAAGCG
GCTCATAATC AAGCAACTCT AAATCTGTGT ACTTCCACTG CAATGGTGCA AGAACTCTCA
GAAAAAGGAA TTCAAAATAC CGCTTTATGG CAAAGAGGAG TGGATACAGA TATTTTCAAA
CCAGAACTCA GAGACGAAGA AATGAGAAAG CGTCTGTTAG GAAGTTTTAG CGATGAAGGA
TCTCTATTGA TATATGTGGG AAGACTCTCA GCAGAAAAAC AAATTGAAAG AATTAAACCT
GTACTTGAAG CACTTCCAAG CACTCGACTA GCTCTTGTTG GAGATGGCCC ATATAGACAA
CAATTAGAAA AAATTTTCCA AGGAACTTCA ACTACCTTTG TGGGATATTT AAGTGGGAAT
GAACTAGCAA GTGCTTATGC ATCCGGTGAT GCCTTTTTAT TCCCCTCAAG CACAGAGACC
CTGGGATTAG TTCTGTTGGA GGCAATGGCT GCTGGATGCC CAGTCGTAGG AGCGAATAAA
GGTGGAATAC CAGATATAAT TTCAGATGGC GAAAATGGAT GTTTATACAA TCCTGATGGA
GAAAATGATG GGGCTTTAAG TTTAATTGAA GCTACAAAAA AATTATTGGG CAACGAAATA
GAACGCACAT CTATGAGAAA AGCAGCTCGT TCAGAAGCTG AGAGATGGGG ATGGGCAGGC
GCTACAAAAC AATTGAAAAG TTATTACGAA GACGTGCTAG ACAAAAAACG ATCAAATATT
GCTGCTTAG
 
Protein sequence
MKIAFFTETF LPKVDGIVTR LTKTIQNLVA SGDEVTVFCP EGCPSSYMGA KVVGVPAMPL 
PLYPELKLGL PGPGVSDELE NFKPDLIHVV NPAVLGLGGI WLAKTNNIPL VASYHTHLPK
YLEHYGMGML EPLLWELLKA AHNQATLNLC TSTAMVQELS EKGIQNTALW QRGVDTDIFK
PELRDEEMRK RLLGSFSDEG SLLIYVGRLS AEKQIERIKP VLEALPSTRL ALVGDGPYRQ
QLEKIFQGTS TTFVGYLSGN ELASAYASGD AFLFPSSTET LGLVLLEAMA AGCPVVGANK
GGIPDIISDG ENGCLYNPDG ENDGALSLIE ATKKLLGNEI ERTSMRKAAR SEAERWGWAG
ATKQLKSYYE DVLDKKRSNI AA