Gene PMN2A_1239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1239 
Symbol 
ID3606632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1741169 
End bp1742065 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content37% 
IMG OID637688114 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_292432 
Protein GI72383077 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.181567 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATTT TGTTAACTGG AGCTAATGGT CAACTTGGTC AGCAAATTGT CTCAGAGTCT 
TTGTCCTTTT CAACTCAAAT GTCTCTTGAA ATTATTCAAT GCACTAGAGA GGAATTAGAT
CTAGTTGATT ACGATGCATG TAAATCTATC GTCGAATATC ACAAACCTGA TTGGGTAATA
AATGCTGGAG CATACACAAA TGTTGAGAAG GCTGAGACAG AGCCAAATAT TGCATATCAG
GTAAATGCTC AAGCTCCAGC TGCATTTGTC GAGGCTTTGA CTAAATATGG TGGACAAATA
ATTCAAATAA GTTCAGATTA TGTTTTCAAT GGCGATCAAA GCTCGCCATA TAAAACTTCT
GACCTAATAC AGCCACTGTG TGTTTATGGA AAGAGTAAGG CGAGAGGGGA AGAATTTGTT
TTAGCTTATG ATAAAGGTAT AGTAATCCGA AGTGGTTGGG TATATGGACC AGTAGGCAAT
AATTTTCTTC TAAAAATGAT ACACCTACAT TCTGAAGAAT CTGATAAACC TAGAACTTTA
AAGGTTGTCT CTGATCAAAT TGGCTCACCT ACATCGACCA AGAATTTGGC TATTGCTGTT
TTACGTTCAA TTATGGTAAG CAGTAAAATA TATACTCCTA AGATTTTGCA TTTTAGCGAT
GCTGGTGTCG CTAGTTGGTA TGACTTTGCC ATAGCAATAA GTGAAATTGC GATTGAGCTT
GATTTATTTC AAAACCCATT AAGAATTGAG CCGATACAAT CAAAAAACTA CAAAACCCTT
GCTAAGCGAC CTAATTATTC TGTGCTCGAT TGCTTTGCCA CAATGAATGC TCTAAAGATG
AAGCCACTTC ATTGGAGAGA TTCTTTATCC CATGTTATGA AGGGACTAAG CAAATAA
 
Protein sequence
MKILLTGANG QLGQQIVSES LSFSTQMSLE IIQCTREELD LVDYDACKSI VEYHKPDWVI 
NAGAYTNVEK AETEPNIAYQ VNAQAPAAFV EALTKYGGQI IQISSDYVFN GDQSSPYKTS
DLIQPLCVYG KSKARGEEFV LAYDKGIVIR SGWVYGPVGN NFLLKMIHLH SEESDKPRTL
KVVSDQIGSP TSTKNLAIAV LRSIMVSSKI YTPKILHFSD AGVASWYDFA IAISEIAIEL
DLFQNPLRIE PIQSKNYKTL AKRPNYSVLD CFATMNALKM KPLHWRDSLS HVMKGLSK