| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMN2A_1207 |
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| Symbol | |
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| ID | 3606600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL2A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007335 |
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| Strand | - |
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| Start bp | 1694576 |
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| End bp | 1695583 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637688082 |
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| Product | type II alternative sigma-70 family RNA polymerase sigma factor |
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| Protein accession | YP_292400 |
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| Protein GI | 72383045 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02997] RNA polymerase sigma factor, cyanobacterial RpoD-like family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACGG CAGTAGAGGC TCCTAAGACT AAGAATTCAT CTTCCGCTGC TTCTGCAAGA
TCCGTTACGG ATATTGACTT AGTTCGTTCT TACTTAAGAG ATATTGGAAG AGTCCCTTTG
CTGTCACACG AGCAGGAAAT TACTTTGGGA AGACAAGTTC AAGATCTTGT TTCCCTTGAA
AATCTTGAGA CCGAACTCGA GAGCGATTTA GGGGAAAAGC CAGACATCAA CTTTTTCGCT
GACAAAGCTG GAATCTCTCC GATCCAATTA AAAAAGAAGT TAAAGAGCGG AAGAAGAGCA
AAAGAGAGAA TGGTTGCAGC CAATCTTCGT TTGGTAGTAA GTGTTGCTAA GAAATACACA
AAAAGAAATA TGGAATTATT AGATTTAATT CAAGAAGGAA CTATCGGCTT AGTTCGGGGA
GTTGAAAAAT TTGATCCTAC TCGTGGATAC AAGTTTTCAA CCTATGCCTA CTGGTGGATA
CGTCAAGGCA TCACACGCGC AATTGCTGAA AAAAGTAGAT CTATAAGACT GCCTATACAC
ATAACTGAAA TGCTAAACAA GTTGAAAAAA GGTCAACGAG AATTAAGTCA AGAACTTTCT
AGAACTCCAA CCTTGAAAGA ACTATCTGAG TATGTTGAGT TGCCAGAGAC TGACGTTAAA
GATTTAATGA GTAGAGCTGG GCAGCCAGTT AGCTTAGAAA CAAAAATTGG CGATGGTGAA
GATACTATTT TATTAGACTT ATTATCTAAC GAAATTGATA TGCCCTCCGA ACAAATTGAA
AGTGATTGCA TGAAGGGTGA TTTAGAAACA TTACTCGAAC AATTACCCGA ATTACAAAAT
CGTGTTTTAA GAATGAGATA CGGTATAGAT GGTGATGATC CGATGAGTCT TACTGGTATT
GGAAGAGTTT TGGGTATTAG TAGAGATAGA GTAAGAAATT TAGAAAGAGA CGGTTTGCGA
GGTTTAAGAA AAACCGGAGA CTCAGTTGAA GCTTATATGG CTTCTTGA
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| Protein sequence | MTTAVEAPKT KNSSSAASAR SVTDIDLVRS YLRDIGRVPL LSHEQEITLG RQVQDLVSLE
NLETELESDL GEKPDINFFA DKAGISPIQL KKKLKSGRRA KERMVAANLR LVVSVAKKYT
KRNMELLDLI QEGTIGLVRG VEKFDPTRGY KFSTYAYWWI RQGITRAIAE KSRSIRLPIH
ITEMLNKLKK GQRELSQELS RTPTLKELSE YVELPETDVK DLMSRAGQPV SLETKIGDGE
DTILLDLLSN EIDMPSEQIE SDCMKGDLET LLEQLPELQN RVLRMRYGID GDDPMSLTGI
GRVLGISRDR VRNLERDGLR GLRKTGDSVE AYMAS
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