Gene PMN2A_1192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1192 
SymbolruvB 
ID3606585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1681444 
End bp1682514 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content37% 
IMG OID637688067 
ProductHolliday junction DNA helicase RuvB 
Protein accessionYP_292385 
Protein GI72383030 
COG category[L] Replication, recombination and repair 
COG ID[COG2255] Holliday junction resolvasome, helicase subunit 
TIGRFAM ID[TIGR00635] Holliday junction DNA helicase, RuvB subunit 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATTG TGTCTTCAAT TACTAATCAT TCTTCTCTTC CCAATGATAA AGGAGAGGAA 
AGATTGGTTG GTCCCAGTCT TTTAAAAGAG GAGCTTAAAT TATCTCAACA AGATTCACTA
AGGCCTAAAT CTTTTGATGA TTTTGTAGGT CAATCTGAAT TAAAAAAAGT TCTTGAGATT
TCAGTTAAAG CATCATTAAA AAGAGGAGAA GCACTTGATC ATTTAATGCT TTATGGGCCG
CCAGGATTGG GAAAAACTAC CATGGCTCTT GTTATTGCTG AGGAATTGGG GGTTAAAGCT
AGAGTTACAA GTGCTCCTGC TCTTGAACGA CCAAGGGATA TTGTTGGATT ATTGATTAAT
ATTCAACCAC GTGAATTGAT TTTTGTTGAT GAGATTCACA GACTCAATCG CATTTCACAG
GAACTTTTGT ATCCAGCTAT GGAAGATAGA AGGTTAGATT TAACTGTAGG TAAGGGTACT
TCTTCTAGAA TGCGATCAAT CGAAATCCCC CCCTTTACCT TAGTAGGTGC TACAACAAAA
CCTGCAGCAT TAAGCTCCCC TATGCGAGAT CGTTTTGGTA TAACTCAGCG ACTAGATTTT
TACAATTATT TGGACCTTGA AAATATAATT AAAAGATCTG CGAAACTTAT TAATTTAGTA
ATTTCAGAGG AAGCATCTCA ACAATTAGCC AAAAGATGTC GAGGTACTCC TCGGATTGCA
AATAGGCTCA TACGAAGAGT TAGAGATTAT GCAGAAGTGT ATTCTCATTC AAAGAAGATC
GATGTTGAAG TTGTGAACGA TGCACTTGAT CTACATCGTG TGGATCAAAG AGGTCTAGAT
GCAACAGATA GAAGTTATAT AGGCTTGTTA GTAAATCAAT ATCAAGGAGG CCCAGTAGGG
CTTGAGACTT TGGCTGCTGG ACTTGGAGAG GATTCAACGA CCCTTGAAAC TGTAGTTGAG
CCTTATCTAA TGCAAATTGG TTTTTTACAC AGAACTTCTA GGGGAAGGGT TGTTACTCCA
GCAGCTAAAA AACATTATTT ACTAACTTCC CCAAATAATA TAGATAAATG A
 
Protein sequence
MAIVSSITNH SSLPNDKGEE RLVGPSLLKE ELKLSQQDSL RPKSFDDFVG QSELKKVLEI 
SVKASLKRGE ALDHLMLYGP PGLGKTTMAL VIAEELGVKA RVTSAPALER PRDIVGLLIN
IQPRELIFVD EIHRLNRISQ ELLYPAMEDR RLDLTVGKGT SSRMRSIEIP PFTLVGATTK
PAALSSPMRD RFGITQRLDF YNYLDLENII KRSAKLINLV ISEEASQQLA KRCRGTPRIA
NRLIRRVRDY AEVYSHSKKI DVEVVNDALD LHRVDQRGLD ATDRSYIGLL VNQYQGGPVG
LETLAAGLGE DSTTLETVVE PYLMQIGFLH RTSRGRVVTP AAKKHYLLTS PNNIDK